CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034461.1-P	Field mustard	cytosol	96.78	96.78
CDY07249	Canola	cytosol, plastid	91.86	95.25
AT1G62050.1	Thale cress	cytosol, nucleus, plastid	81.86	77.4
KRH51100	Soybean	cytosol	67.63	70.25
KRH02059	Soybean	cytosol	65.59	68.86
VIT_10s0116g01680.t01	Wine grape	nucleus	66.61	67.06
Solyc02g080610.2.1	Tomato	cytosol	62.54	63.08
CDY21008	Canola	cytosol	49.66	57.0
PGSC0003DMT400042418	Potato	cytosol, plastid	43.73	55.97
CDY31210	Canola	nucleus	48.98	55.68
CDX97982	Canola	cytosol, nucleus, peroxisome	57.12	52.74
GSMUA_Achr2P13940_001	Banana	cytosol	47.12	48.52
CDX85149	Canola	nucleus, plastid	44.75	44.67
HORVU2Hr1G046900.2	Barley	plastid	43.9	43.24
TraesCS2A01G224100.1	Wheat	plastid	43.9	42.88
TraesCS2B01G274300.1	Wheat	plastid	43.73	42.64
TraesCS2D01G230400.1	Wheat	plastid	43.56	42.55
EER99440	Sorghum	plastid	44.07	42.28
Os07t0512100-01	Rice	plastid	43.73	42.09
CDY45348	Canola	cytosol	41.19	42.04
Zm00001d021613_P001	Maize	plastid	43.56	41.79
CDY48669	Canola	nucleus	43.56	41.12
CDX86213	Canola	nucleus	43.56	41.05
CDX89790	Canola	cytosol	43.56	40.54
CDY18256	Canola	cytosol	43.56	39.91
CDY57011	Canola	nucleus, plastid	45.42	38.34
CDY00019	Canola	mitochondrion	45.42	38.18
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	56.27	34.3
CDX77466	Canola	plastid	43.73	24.04

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	UniProt:A0A078GHU1	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY24874	ProteinID:CDY24874	ProteinID:CDY24874.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00028617001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF11904
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF7	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI0004EE5DBE	SEG:seg	:	:	:	:

Description

BnaA03g59780DBnaA03g59780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHU1]

Coordinates

chrLK032165:-:169857..171937

Molecular Weight (calculated)

66609.1 Da

IEP (calculated)

9.868

GRAVY (calculated)

-0.550

Length

590 amino acids

Sequence
(BLAST)

001: MARPSSASAT AKLPSIKPED YGHSPVHYAV VLGDHAALSR LLSSVPKLGD PEQIRTESDS LSQERIADQI SAVLDRRDVP SRETPLHLAV RLNDLFAAKA
101: ISSAGADISL HNSAGWNPLQ EAFCRRNSEI MKVLLRHHHR LAWCKWRRRL PRLIGVLRRM RDFYMEISFH FESSVIPFVG KIAPSDTYKI WKRDGNLRAD
201: TTLAGFDGLK IQRADQSFLF LGDGDESLDI SPGSLLVLNR DDRKILDAFE SAGAPISDSD IAGFCSQSSL YRPGMDVTKA ELVGRMNWRR QEKMESVGDW
301: KARVYEIQKV TFSFRSRKIV NEGDSSEQVQ PLELDEDDDG FLVAENPSFL APQRSQRRHS SFVNEDRDWI SVGRKSVDVY PSAAPPPRRS VTQFQPPRRS
401: VAVPSTVNPP PSPQIKEKEF VKSLHPSVWL TEQFPLKTEE LLPLLDILAN KVKAVARMRE LLTTKFPPGT FPVKLSIPVV PTVKVVITFT KFVDLPPAER
501: FYTPLSSPRF LSCADQWDDD EEKSDARNST SRPSSWLRRA GLGSQRRTDE EDQQSPDPFA IPIGYKWTSM KNNNKSDSKM KRSKSTKRSK

Best Arabidopsis Sequence Match ( AT1G62050.1 )
(BLAST)

001: MARPSSASAT TAIRPEDYSH SPVHYAVVLG DHGALTRLLS SLPKLGDPEQ IRTESDSLSQ ERVADQISAV LDRRDVPSRE TPLHLAVRLD DLFAARAISS
101: AGGDISLQNA SGWNPLQEAF CRRNSEVMKV LLRHHHRLAW CKWRRRLPRL IAVLRRMRDF YMEISFHFES SVIPFVGKIA PSDTYKIWKR DGNLRADTTL
201: AGFDGLKIQR ADQSFLFLGD GDESLDISPG SLLVLNRDDR KILDAFESAG APISDSDIAG FCSQSSLYRP GMDVTKAELV GRTNWRRQEK MENVGEWKAR
301: VYEIQKVTFS FRSRKIVTGD GSEQVLPLEL DEDDEGFLVA ENPSFLAPPP RSQRRHSSFV KEDRDWISVG RKSVDVYPSA APPPPRQSQS PRRSVSQFQP
401: PRRSMAQVQP PRRSVAQAQP PRRSVALPST VSPVNPPPSP QIKEKEFVKS LHPSVWLTEQ FPLKTEELLP LLDILANKVK AVARMRDLLT TKFPPGTFPV
501: KLSIPVVPTV KVVITFTKFV ELPPAETFYT PLSSPRFLYS ATAGEEDHSD GEKPDARNSI SRPSTWLRLA TGKGSHRRVE EEEQQTPDPF AIPIGYKWTS
601: MSSSNSKSGN SSKMKKSKST KRTK

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q94CF4]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.