CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18256	Canola	cytosol	92.9	91.46
Bra015348.1-P	Field mustard	cytosol	94.16	91.28
AT1G04780.1	Thale cress	cytosol	80.76	77.11
GSMUA_Achr5P13140_001	Banana	mitochondrion	58.99	70.7
GSMUA_Achr4P26640_001	Banana	cytosol	62.78	66.22
VIT_05s0136g00240.t01	Wine grape	cytosol	67.67	65.8
CDX85149	Canola	nucleus, plastid	60.73	65.14
Solyc09g091560.2.1	Tomato	cytosol	65.46	63.65
PGSC0003DMT400076190	Potato	cytosol	65.3	63.5
GSMUA_Achr1P01140_001	Banana	cytosol	53.79	62.34
EER98424	Sorghum	cytosol	63.72	62.06
Os07t0436100-01	Rice	cytosol	63.72	61.59
Zm00001d019522_P001	Maize	cytosol	62.93	61.01
Zm00001d005442_P001	Maize	cytosol	62.93	60.73
CDY45348	Canola	cytosol	54.73	60.03
TraesCS2D01G236000.1	Wheat	cytosol	61.83	59.67
TraesCS2A01G237500.1	Wheat	cytosol	61.36	59.39
TraesCSU01G145200.1	Wheat	cytosol	60.73	58.78
CDY48669	Canola	nucleus	54.26	55.04
CDX86213	Canola	nucleus	53.79	54.47
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	44.16	50.27
KRG90235	Soybean	nucleus	42.43	49.09
CDY00019	Canola	mitochondrion	53.47	48.29
CDY57011	Canola	nucleus, plastid	53.0	48.07
HORVU2Hr1G052030.1	Barley	cytosol	7.57	47.52
CDY07249	Canola	cytosol, plastid	39.91	44.46
CDY24874	Canola	cytosol	40.54	43.56
CDY21008	Canola	cytosol	33.91	41.83
CDY31210	Canola	nucleus	34.07	41.62
CDX97982	Canola	cytosol, nucleus, peroxisome	38.64	38.34
CDX77466	Canola	plastid	58.68	34.67
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	37.85	24.79

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlants:CDX89790	ProteinID:CDX89790	ProteinID:CDX89790.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00150236001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF11904	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0004EE608A
SEG:seg	:	:	:	:	:

Description

BnaA10g02920D

Coordinates

chrLK031861:+:82309..84815

Molecular Weight (calculated)

70748.7 Da

IEP (calculated)

8.208

GRAVY (calculated)

-0.604

Length

634 amino acids

Sequence
(BLAST)

001: MASVIDVTNY GHSPVHRAVV TRDYAALKKL LSSLPKMRDP SEVKTEAASV SEETKADSIA SVIDRRDVIN RDTALHLAVK LGDETSAEML MVAGADWSLQ
101: NEQGWSALQE AICGREERIA MIIVKHYQPL AWAKWCRRLP RLVATMHRMR DFYMEITFHF ESSVIPFISR VAPSDTYKIW KRGANLRADM TLAGFDGFRI
201: QRSDQTILFL GDGSEDGKVP SGSLLMISHK DKEIMNALDG AGSPASEDEV RGEVAAMSKT SIFRPGIDVT QAVLFPQLTW RRQERSEMVG EWKAKVYDMH
301: NVVVSIKSRR VPGAMSDEEL FSNNNNQENE TESEDLGDVL TEDERKQLEL ALKVDSPEGG SCNTPHVDRD IPIMDGNGYC NKQEKKGWFG GWRKRDEGHS
401: KRSSVPPRSS LCVDEKKVSD LLEDDGRQVK PGRHSTADTV ASKASTSEGS SSKRKEGGSS SSSRENEYKK GLRPVLWLSE RFPLQTKELL PLLDILANKV
501: KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTTS NVRNSPREET QFSSSSSQRP SASFSSGGFS IGKAENDQDP
601: FAIPRGYNWI TSEEKKKKIQ EKNKAKKSKS AQNS

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.