Factsheet for HORVU2Hr1G052030.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G145200.1	Wheat	cytosol	92.08	14.2
TraesCS2D01G236000.1	Wheat	cytosol	92.08	14.16
TraesCS2A01G237500.1	Wheat	cytosol	90.1	13.89
EER98424	Sorghum	cytosol	83.17	12.9
Zm00001d019522_P001	Maize	cytosol	83.17	12.84
Os07t0436100-01	Rice	cytosol	82.18	12.65
GSMUA_Achr5P13140_001	Banana	mitochondrion	64.36	12.29
GSMUA_Achr1P01140_001	Banana	cytosol	65.35	12.07
Zm00001d005442_P001	Maize	cytosol	78.22	12.02
GSMUA_Achr4P26640_001	Banana	cytosol	63.37	10.65
CDY45348	Canola	cytosol	57.43	10.03
CDX85149	Canola	nucleus, plastid	57.43	9.81
KRG90235	Soybean	nucleus	49.51	9.12
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	48.51	8.8
VIT_05s0136g00240.t01	Wine grape	cytosol	55.45	8.59
Solyc09g091560.2.1	Tomato	cytosol	55.45	8.59
KRG90233	Soybean	cytosol	54.46	8.47
AT3G24210.1	Thale cress	nucleus	50.49	8.4
PGSC0003DMT400076190	Potato	cytosol	53.47	8.28
KRH33461	Soybean	cytosol	51.49	8.01
AT1G04780.1	Thale cress	cytosol	50.49	7.68
CDY18256	Canola	cytosol	48.51	7.61
CDX89790	Canola	cytosol	47.52	7.57
HORVU2Hr1G046900.2	Barley	plastid	44.55	7.51
Bra015348.1-P	Field mustard	cytosol	47.52	7.34
HORVU6Hr1G089010.1	Barley	nucleus	53.47	7.1
CDX77466	Canola	plastid	55.45	5.22
Bra015003.1-P	Field mustard	cytosol, plastid	55.45	5.02

Protein Annotations

EnsemblPlants:HORVU2Hr1G052030.1	EnsemblPlantsGene:HORVU2Hr1G052030	Gene3D:1.25.40.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	PFscan:PS50088	PFscan:PS50297	UniParc:UPI000B479985
UniProt:A0A287I078	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:308477837..308478585

Molecular Weight (calculated)

10714.7 Da

IEP (calculated)

6.091

GRAVY (calculated)

-0.267

Length

101 amino acids

Sequence
(BLAST)

001: MAGVDAARYA QSPAHHAVAM QDHAALRRVL DALPQARKPE EIRTEADSIA EEARAEAVSA IVDRRDVPGR ETPLHLAVRF GDATAAEMLM AAGPTGACRT
101: S

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.