Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85149 | Canola | nucleus, plastid | 77.59 | 79.7 |
| CDY45348 | Canola | cytosol | 71.99 | 75.61 |
| GSMUA_Achr5P13140_001 | Banana | mitochondrion | 54.86 | 62.95 |
| VIT_05s0136g00240.t01 | Wine grape | cytosol | 65.24 | 60.74 |
| GSMUA_Achr4P26640_001 | Banana | cytosol | 59.14 | 59.73 |
| GSMUA_Achr1P01140_001 | Banana | cytosol | 53.71 | 59.6 |
| Solyc09g091560.2.1 | Tomato | cytosol | 62.77 | 58.44 |
| PGSC0003DMT400076190 | Potato | cytosol | 62.77 | 58.44 |
| AT1G04780.1 | Thale cress | cytosol | 63.43 | 57.98 |
| EER98424 | Sorghum | cytosol | 61.28 | 57.14 |
| Zm00001d005442_P001 | Maize | cytosol | 61.45 | 56.77 |
| Zm00001d019522_P001 | Maize | cytosol | 60.96 | 56.57 |
| Os07t0436100-01 | Rice | cytosol | 59.97 | 55.49 |
| TraesCS2A01G237500.1 | Wheat | cytosol | 59.47 | 55.11 |
| TraesCS2D01G236000.1 | Wheat | cytosol | 59.64 | 55.1 |
| TraesCSU01G145200.1 | Wheat | cytosol | 58.98 | 54.66 |
| KRH33464 | Soybean | cytoskeleton, cytosol, nucleus | 47.45 | 51.71 |
| KRG90235 | Soybean | nucleus | 45.63 | 50.55 |
| HORVU2Hr1G052030.1 | Barley | cytosol | 8.4 | 50.49 |
| AT3G04470.1 | Thale cress | nucleus | 52.22 | 49.53 |
| Bra015003.1-P | Field mustard | cytosol, plastid | 78.09 | 42.47 |
| CDX77466 | Canola | plastid | 74.3 | 42.03 |
| AT1G62050.1 | Thale cress | cytosol, nucleus, plastid | 43.0 | 41.83 |
| AT1G11740.1 | Thale cress | cytosol | 41.02 | 38.66 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.2 | EntrezGene:822007 | ProteinID:AEE76873.1 | InterPro:ANKRD13 | ArrayExpress:AT3G24210 |
| EnsemblPlantsGene:AT3G24210 | RefSeq:AT3G24210 | TAIR:AT3G24210 | RefSeq:AT3G24210-TAIR-G | EnsemblPlants:AT3G24210.1 | TAIR:AT3G24210.1 |
| InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | Unigene:At.37573 | UniProt:F4J6I7 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_189063.2 | PFAM:PF11904 |
| PO:PO:0009005 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR12447 | PANTHER:PTHR12447:SF17 | SUPFAM:SSF48403 |
| UniParc:UPI0000196DF3 | SEG:seg | : | : | : | : |
Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4J6I7]
Coordinates
chr3:-:8753385..8756151
Molecular Weight (calculated)
67830.8 Da
IEP (calculated)
8.514
GRAVY (calculated)
-0.520
Length
607 amino acids
Sequence
(BLAST)
(BLAST)
001: MENVDVSKYI HSSVHKAVAS KDYVGLRAIL SSLPKPKDPC EIQTEAASLS EEAKSDTISA VIDRRDVPSR DTPLHLAVKL CDSTSVEMLM VAGADWTLQN
101: EDGWNALQEA VCSRQEAIAM IIVRHYQPLA WAKWCRRLPR LIATMSKMKD FYLEMSFHFE SSVVPFVSKV APSDTYKVWK VGSNLRADMT MAGFDGFKIQ
201: RSDQSILFLG DGSEDGEVAR GSLYMVNHKD KEVMNALDGA CGVPSEEEVR KEVAAMCKSN IFRPGIDVTQ AVLSPQTNWR RQEKSEMVGP WKAKVYEMNN
301: VVVSVKSRKV PGSLAVEGGD DDICDVLTDE EQKQLEDALK LDLPDFPNVN GENGFIVHHQ EDHVEANKKA EKKGWLGGWR KKETKQEKQI QYAPPRSSLC
401: VNEKVSNLLG ESNQIKPGRH SVDNEHYRKP KALVSDKTRH ESEYKKGLRP VLWLSPNFPL QTEELLPLLD ILANKVKAIR RLRELLTTKL PSGTFPVKVA
501: IPVVPTIKVL VTFTKFEEIE PVDEFKTPLS SPTSSGYESP AAATTDFTNS SSSSSWFRRS RSNKDGGSSK SKTLQDPFAI PTGYTWVSLE SKKRKPKKGG
601: KKTEQVS
101: EDGWNALQEA VCSRQEAIAM IIVRHYQPLA WAKWCRRLPR LIATMSKMKD FYLEMSFHFE SSVVPFVSKV APSDTYKVWK VGSNLRADMT MAGFDGFKIQ
201: RSDQSILFLG DGSEDGEVAR GSLYMVNHKD KEVMNALDGA CGVPSEEEVR KEVAAMCKSN IFRPGIDVTQ AVLSPQTNWR RQEKSEMVGP WKAKVYEMNN
301: VVVSVKSRKV PGSLAVEGGD DDICDVLTDE EQKQLEDALK LDLPDFPNVN GENGFIVHHQ EDHVEANKKA EKKGWLGGWR KKETKQEKQI QYAPPRSSLC
401: VNEKVSNLLG ESNQIKPGRH SVDNEHYRKP KALVSDKTRH ESEYKKGLRP VLWLSPNFPL QTEELLPLLD ILANKVKAIR RLRELLTTKL PSGTFPVKVA
501: IPVVPTIKVL VTFTKFEEIE PVDEFKTPLS SPTSSGYESP AAATTDFTNS SSSSSWFRRS RSNKDGGSSK SKTLQDPFAI PTGYTWVSLE SKKRKPKKGG
601: KKTEQVS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.