Factsheet for TraesCSU01G145200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G237500.1	Wheat	cytosol	98.32	98.32
TraesCS2D01G236000.1	Wheat	cytosol	95.73	95.43
HORVU2Hr1G052030.1	Barley	cytosol	14.2	92.08
Os07t0436100-01	Rice	cytosol	87.79	87.65
EER98424	Sorghum	cytosol	85.5	86.02
Zm00001d019522_P001	Maize	cytosol	84.27	84.4
Zm00001d005442_P001	Maize	cytosol	83.66	83.41
GSMUA_Achr5P13140_001	Banana	mitochondrion	63.82	79.02
GSMUA_Achr4P26640_001	Banana	cytosol	69.31	75.54
GSMUA_Achr1P01140_001	Banana	cytosol	59.54	71.3
VIT_05s0136g00240.t01	Wine grape	cytosol	68.4	68.71
Solyc09g091560.2.1	Tomato	cytosol	66.72	67.02
PGSC0003DMT400076190	Potato	cytosol	66.56	66.87
KRG90233	Soybean	cytosol	63.97	64.56
KRH33461	Soybean	cytosol	63.66	64.25
CDY18256	Canola	cytosol	60.46	61.49
AT1G04780.1	Thale cress	cytosol	61.68	60.84
CDX85149	Canola	nucleus, plastid	54.81	60.74
CDX89790	Canola	cytosol	58.78	60.73
Bra015348.1-P	Field mustard	cytosol	60.0	60.09
AT3G24210.1	Thale cress	nucleus	54.66	58.98
CDY45348	Canola	cytosol	50.23	56.92
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	41.68	49.01
KRG90235	Soybean	nucleus	40.31	48.18
CDX77466	Canola	plastid	52.82	32.25
Bra015003.1-P	Field mustard	cytosol, plastid	54.05	31.72

Protein Annotations

EnsemblPlants:TraesCSU01G145200.1	EnsemblPlantsGene:TraesCSU01G145200	Gene3D:1.25.40.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	PFAM:PF11904	PFAM:PF13857	PFscan:PS50088
PFscan:PS50297	SEG:seg	SMART:SM00248	SUPFAM:SSF48403	MapMan:35.2	:

Description

No Description!

Coordinates

chrUn:-:156525146..156530766

Molecular Weight (calculated)

73384.1 Da

IEP (calculated)

8.464

GRAVY (calculated)

-0.602

Length

655 amino acids

Sequence
(BLAST)

001: MAGVDAARYA QSPAHHAVAM QDHAALRRVL DALPQARKPE EIRTEADSIA EEARAEAVSA ILDRRDVPGR ETPLHLAVRF GDAAAAEMLM AAGADWSLQN
101: EHGWSALQEA ICAREEALAR VIVRHYQPLA WAKWCRRLPR VVAAMRRMRD FYMEITFHFE SSVIPFISRI APSDTYRVWK RGANLRADMT LAGFDGFKIQ
201: RSDQTILFLG EGSQDGKVPP GSLCMINHKD KEVMNALEGA GAPASEAEVQ QEVTAMSQTN IFRPGIDVTQ AVLLPQVTWR RQERTEAVGL WKAKVYDMHH
301: VMVSVKSRRV PGAMTDEEFF SACNENDTES EGFDDVLTDE EKRQLESALK MDSSDAVGDS QSDTFVGPRH SCFEPREREI PIEDLSISGN GESKHDKKGW
401: FSNWGKRGQT GISKLEMTKK MAPPKSSLFV DEKVNDLRLG SPSNVQTKPG RHSVDIMRRD ENGNGKEKDC RKLATSENGH RRKESSKESE YKKGLRPVLW
501: LSPNFPLRTE ELLPLLDILA NKVKAIRRLR DLLTTKLPPG TFPVKVAIPV VPTIRVLVTF TKFEELQPLE EFSTPPSSPD NCKSPGAPTS SSSWVQWIKA
601: PYRQNFSTAQ GPSNRVEDIQ DPFVIPADYA WTTPGERKKR TQENKNKSKK GRTAS

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.