CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90235	Soybean	nucleus	86.89	88.32
GSMUA_Achr5P13140_001	Banana	mitochondrion	50.63	53.31
GSMUA_Achr1P01140_001	Banana	cytosol	50.27	51.19
HORVU2Hr1G052030.1	Barley	cytosol	8.8	48.51
GSMUA_Achr4P26640_001	Banana	cytosol	52.06	48.25
KRH33461	Soybean	cytosol	55.66	47.77
KRG90233	Soybean	cytosol	55.48	47.61
AT3G24210.1	Thale cress	nucleus	51.71	47.45
CDX85149	Canola	nucleus, plastid	49.73	46.87
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	23.16	44.64
CDY45348	Canola	cytosol	45.96	44.29
CDX89790	Canola	cytosol	50.27	44.16
CDY18256	Canola	cytosol	50.99	44.1
Bra015348.1-P	Field mustard	cytosol	51.53	43.88
AT1G04780.1	Thale cress	cytosol	52.24	43.83
Zm00001d019522_P001	Maize	cytosol	51.35	43.73
Os07t0436100-01	Rice	cytosol	51.17	43.45
EER98424	Sorghum	cytosol	50.63	43.32
Zm00001d005442_P001	Maize	cytosol	50.81	43.07
TraesCS2A01G237500.1	Wheat	cytosol	49.37	41.98
TraesCSU01G145200.1	Wheat	cytosol	49.01	41.68
TraesCS2D01G236000.1	Wheat	cytosol	48.83	41.4
KRG92643	Soybean	cytosol	46.5	40.16
KRH02059	Soybean	cytosol	40.22	39.86
KRH51100	Soybean	cytosol	40.57	39.79
KRH36464	Soybean	plastid	40.4	38.86
KRH68787	Soybean	nucleus	47.76	38.61
KRH11439	Soybean	nucleus	40.04	37.86
KRH34141	Soybean	plastid	46.68	35.86
KRG97040	Soybean	nucleus	17.59	31.82
CDX77466	Canola	plastid	48.65	25.26
Bra015003.1-P	Field mustard	cytosol, plastid	49.19	24.55

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100789298	MapMan:35.2	EMBL:ACUP02006501	InterPro:ANKRD13	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_10G124500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	UniProt:I1LAI7	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	EnsemblPlants:KRH33464	ProteinID:KRH33464	ProteinID:KRH33464.1	PFAM:PF11904
PFAM:PF12796	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248
SUPFAM:SSF48403	UniParc:UPI000233C7A6	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:32478017..32482915

Molecular Weight (calculated)

62930.5 Da

IEP (calculated)

10.001

GRAVY (calculated)

-0.611

Length

557 amino acids

Sequence
(BLAST)

001: MAGLNVSEYG HSCVHKAIIL KDHVGLKEIL GVLPKLGNPF EIKTEAASIA EDEKAAAISV VVDRRDVPHG DTPLHLAAKL GDIVATEMLM DAGANGRLKN
101: TEGWTALREA IINKQDKIAM IMIKYYWNDY DKKYYRRLPR YIGTVRRMKD FYMEITFHFE SSVIPFISRI APSDTYKIWK KGGNMRADMT LAGFDGLKIK
201: RSNQSILFLG DGTSDDERKF PGSLFKVLHK EKEVIVASPR KVAPTDRQVK NTLARKSRSE SVRVGIDVSQ ALLVPQLTWR RKERKEMVGP WKAKVYDMQN
301: VVLSVKSRRI PGAPPPEAKP APKQANMKDN EKIEDILTDE ERKQLEAAMN SSDDNGHTHK SKHAKKEKKG RSGGHRDHNK DKNTTSAQSA EISVNQKGES
401: QFKRGMMPSL WLSQNFPLKI DELLPMLDIL AEKLKAVRRL RELLTTKLPK ESFPIKVAIP VVSTVRVLVT FTKFEEMQHE NADEFESAPS SPTSSDQENP
501: EEEHSSSWFG WIKTPSRSST TSAESSSKIF DDQDLFAIPS GYKWVTIEDK LKKRGLE

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.