CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33461	Soybean	cytosol	96.61	96.61
VIT_05s0136g00240.t01	Wine grape	cytosol	77.97	77.61
PGSC0003DMT400076190	Potato	cytosol	73.96	73.62
GSMUA_Achr5P13140_001	Banana	mitochondrion	59.94	73.53
Solyc09g091560.2.1	Tomato	cytosol	73.81	73.47
GSMUA_Achr4P26640_001	Banana	cytosol	64.71	69.88
GSMUA_Achr1P01140_001	Banana	cytosol	56.55	67.09
EER98424	Sorghum	cytosol	67.18	66.97
Os07t0436100-01	Rice	cytosol	66.72	66.01
Zm00001d019522_P001	Maize	cytosol	66.1	65.6
TraesCS2D01G236000.1	Wheat	cytosol	65.95	65.14
Zm00001d005442_P001	Maize	cytosol	65.95	65.14
TraesCS2A01G237500.1	Wheat	cytosol	65.33	64.73
TraesCSU01G145200.1	Wheat	cytosol	64.56	63.97
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	25.89	58.13
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	47.61	55.48
HORVU2Hr1G052030.1	Barley	cytosol	8.47	54.46
KRG90235	Soybean	nucleus	45.3	53.65
KRG92643	Soybean	cytosol	52.85	53.18
KRH68787	Soybean	nucleus	53.31	50.22
KRH51100	Soybean	cytosol	41.29	47.18
KRH34141	Soybean	plastid	52.54	47.03
KRH02059	Soybean	cytosol	40.52	46.8
KRH36464	Soybean	plastid	40.52	45.42
KRH11439	Soybean	nucleus	40.37	44.48
KRG97040	Soybean	nucleus	19.41	40.91

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100806664	MapMan:35.2	EMBL:ACUP02012567	InterPro:ANKRD13	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_20G076500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	UniProt:I1NEG9	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	EnsemblPlants:KRG90233	ProteinID:KRG90233	ProteinID:KRG90233.1	ProteinID:KRG90234.1
PFAM:PF11904	PFAM:PF12796	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17
SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI000233D99C	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr20:+:27699573..27706742

Molecular Weight (calculated)

73109.9 Da

IEP (calculated)

7.439

GRAVY (calculated)

-0.600

Length

649 amino acids

Sequence
(BLAST)

001: MAGIDATKYG HSPVHKALVL KDHGELRRIL AGLPRLRSTA EIRTEAVSIL EEEKADAIAA VIDRRDVPNR DTPLHLAVKF GDEVATELLM VAGADWSLQN
101: EQGWSALQEA ICSREEGIAK IIIKHYQPLA WAKWCRRLPR LVGTMRRMRD FYMEITFHFE SSVIPFISRI APSDTYKIWK RGANLRADMT LAGFDGFRIQ
201: RSDQSILFLG DGSEDGKVPP GSLCMISHKE KEVLNALDDA GFPANDEEVQ QEVVAMSKTN IFRPGIDVTQ AVLLPQLTWR RQEKTEMVGP WKAKVYDMHN
301: VVVSIKSRGV PGAMTDDELF SSCNENETES EELNDILTED ERRQLEDALR LDSTDLNNES DEVIIGHRHS CYEHREIPIE EGNYNKSGEN KLEKKGWFGG
401: WRKKDSKPEA PKKIAPPRSS LCIEEKVSDL LGDSPSRNQS KPGRHSVEIA VKGDESRRRK DAKASSANSD SRSRHKDGNR ENEYKKGLRP ILWLSPNFPL
501: KTEELLPLLD IVANKVKAIR RLRELLTTKL PMGTFPVKVA IPVVPTIRVL VTFTKFEELE PVDEFATPPS SPSAAEQESP AVPHFSASSW FQWIKAPYRS
601: STSAPGSSSR IENIEDPFAI PSDYTWVTAE AKKKKMQEKN KSKKGKSHN

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.