Factsheet for VIT_05s0136g00240.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g091560.2.1	Tomato	cytosol	80.21	80.21
PGSC0003DMT400076190	Potato	cytosol	79.91	79.91
KRH33461	Soybean	cytosol	78.22	78.58
KRG90233	Soybean	cytosol	77.61	77.97
GSMUA_Achr5P13140_001	Banana	mitochondrion	63.04	77.69
GSMUA_Achr4P26640_001	Banana	cytosol	68.25	74.04
EER98424	Sorghum	cytosol	71.32	71.43
Zm00001d019522_P001	Maize	cytosol	70.86	70.64
Os07t0436100-01	Rice	cytosol	70.55	70.12
GSMUA_Achr1P01140_001	Banana	cytosol	58.74	70.02
TraesCS2D01G236000.1	Wheat	cytosol	70.09	69.56
TraesCS2A01G237500.1	Wheat	cytosol	69.63	69.31
Zm00001d005442_P001	Maize	cytosol	69.79	69.25
CDY18256	Canola	cytosol	67.94	68.79
TraesCSU01G145200.1	Wheat	cytosol	68.71	68.4
CDX89790	Canola	cytosol	65.8	67.67
Bra015348.1-P	Field mustard	cytosol	67.79	67.58
AT1G04780.1	Thale cress	cytosol	68.4	67.17
CDX85149	Canola	nucleus, plastid	60.58	66.84
AT3G24210.1	Thale cress	nucleus	60.74	65.24
CDY45348	Canola	cytosol	54.75	61.76
HORVU2Hr1G052030.1	Barley	cytosol	8.59	55.45
VIT_14s0036g01030.t01	Wine grape	nucleus	54.75	54.09
VIT_10s0116g01680.t01	Wine grape	nucleus	41.41	46.08
VIT_00s1428g00010.t01	Wine grape	cytosol, plastid	14.57	43.98
CDX77466	Canola	plastid	57.82	35.14
Bra015003.1-P	Field mustard	cytosol, plastid	59.97	35.04

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100263242	wikigene:100263242	MapMan:35.2	EMBL:AM433255	InterPro:ANKRD13
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ProteinID:CAN80381	ProteinID:CAN80381.1	ProteinID:CCB62725
ProteinID:CCB62725.1	UniProt:F6I707	EMBL:FN596762	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	EntrezGene:LOC100263242	wikigene:LOC100263242	PFAM:PF11904	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SUPFAM:SSF48403	TIGR:TC67731	UniParc:UPI00015CC4A5	ArrayExpress:VIT_05s0136g00240
EnsemblPlantsGene:VIT_05s0136g00240	EnsemblPlants:VIT_05s0136g00240.t01	unigene:Vvi.8680	RefSeq:XP_002263910	RefSeq:XP_002263910.1	RefSeq:XP_010650261.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:13561357..13573703

Molecular Weight (calculated)

73132.2 Da

IEP (calculated)

7.546

GRAVY (calculated)

-0.575

Length

652 amino acids

Sequence
(BLAST)

001: MAGIDVSKYT HSPVHKAIAL RDYASLRKIL ASLPRLCNPN EVQTEMASLA EEEKAEAISA VIDRRDVPNR DTPLHLAVKL GDNTATEMLM LAGADWSLQN
101: EQGWSALQEA ICNREEGIAM TIVRHYQPLA WAKWCRRLPR LVATMGRMRD FYMEITFHFE SSVIPFISRI APSDTYKIWK RGANLRADMT LAGFDGFRIQ
201: RSDQSILFLG DGSEDGKVPP GSLCMIVHKE KEVMNALDGA GSPATDAEVQ QEVAAMSQTN IFRPGIDVTQ AVLLPQLTWR RQEKTEMVGA WRAKVYDMHN
301: VVVSIKSRRV PGAMTDDEFF SSCNENEVEN EELDDILTED ERRQLEVALK LDSSDMTNEN GEGIIGHRHS CYEHREIPIE EVNGCRNGEM KQEKKGWFGG
401: WRKRDSKQEG QKKIAPPRSS LCVDEKVSDL LGDSPINQSK PGRHSVEIVV RGDEPRRGRD SKTSSSMISE SGGRRKDGGR ENEYKKGLRP TLWLSPSFPL
501: QTEELLPLLD ILANKVKAIR RLRELLTTKL PMGTFPVKVA IPVVPTIRVL VTFTKFEELQ PVDEFTTPPS SPSAAGPESP AMMQSSSSSW FQWIKAPYQR
601: PTSSSNGGSS SRIDNIQEPF AIPSDYTWVT AEAKKKKMQE KNKSKKGKSQ NP

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.