CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89790	Canola	cytosol	91.46	92.9
AT1G04780.1	Thale cress	cytosol	81.99	79.52
GSMUA_Achr5P13140_001	Banana	mitochondrion	59.16	72.02
VIT_05s0136g00240.t01	Wine grape	cytosol	68.79	67.94
GSMUA_Achr4P26640_001	Banana	cytosol	63.2	67.72
Solyc09g091560.2.1	Tomato	cytosol	67.24	66.41
PGSC0003DMT400076190	Potato	cytosol	67.08	66.26
CDX85149	Canola	nucleus, plastid	60.09	65.48
GSMUA_Achr1P01140_001	Banana	cytosol	54.35	63.99
EER98424	Sorghum	cytosol	64.6	63.9
Os07t0436100-01	Rice	cytosol	64.6	63.41
Zm00001d019522_P001	Maize	cytosol	63.66	62.69
Zm00001d005442_P001	Maize	cytosol	63.51	62.25
TraesCS2D01G236000.1	Wheat	cytosol	62.42	61.19
TraesCS2A01G237500.1	Wheat	cytosol	62.11	61.07
CDY45348	Canola	cytosol	54.66	60.9
TraesCSU01G145200.1	Wheat	cytosol	61.49	60.46
CDY48669	Canola	nucleus	54.19	55.84
CDX86213	Canola	nucleus	52.95	54.47
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	44.1	50.99
KRG90235	Soybean	nucleus	42.39	49.82
HORVU2Hr1G052030.1	Barley	cytosol	7.61	48.51
CDY00019	Canola	mitochondrion	52.8	48.43
CDY57011	Canola	nucleus, plastid	52.48	48.35
CDY07249	Canola	cytosol, plastid	39.29	44.46
CDY24874	Canola	cytosol	39.91	43.56
CDY21008	Canola	cytosol	33.54	42.02
CDY31210	Canola	nucleus	33.85	42.0
CDX97982	Canola	cytosol, nucleus, peroxisome	38.35	38.65
CDX77466	Canola	plastid	57.92	34.76
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	38.04	25.31

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	UniProt:A0A078FYY7	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY18256	ProteinID:CDY18256	ProteinID:CDY18256.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00002790001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF11904
PFAM:PF13637	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248
SUPFAM:SSF48403	UniParc:UPI0004EDFBFF	SEG:seg	:	:	:

Description

BnaC05g02790DBnaC05g02790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYY7]

Coordinates

chrLK032083:-:573213..575552

Molecular Weight (calculated)

72074.2 Da

IEP (calculated)

7.943

GRAVY (calculated)

-0.625

Length

644 amino acids

Sequence
(BLAST)

001: MASVIDVTNY GHSPVHRAVV TRDYAALKKL LSSLPKMRDP SEVKTEAASV AEETKADSIA SVIDRRDVIN RDTALHLAVK LGDETSAEML MASGADWSLQ
101: NEQGWSALQE AICGREERIA MIIVRHYQPL AWAKWCRRLP RLVATMHRMR DFYMEITFHF ESSVIPFISR VAPSDTYKIW KRGANLRADM TLAGFDGFRI
201: QRSDQTILFL GDGSEDGKVP SGSLLMISHK DKEIMNALDG AGAGAPASED EVRGEVAAMS KTSIFRPGID VTQAVLFPQL TWRRQEKSEM VGEWKAKVYD
301: MHNVVVSIKS RRVPGAMSDE ELFSNNNNQE NETESEDLGD VLTEDERRQL ELALKVDSPE GGSCNTPQPL HVDRDIPIMD GNGYCNKQEK KGWFGGWRKR
401: DEGHSKRSSV PPRSSLCVDE KVSDLLEDDG RQAKPGRHST ADTLTRDSSS KASTSEGSGS STSKRKEGGS SRENEYKKGL RPVLWLSERF PLQTKELLPL
501: LDILANKVKA IRRLRELMTT KLPSGTFPVK VAIPVIPTIR VLVTFTKFEE LEAIEDEFVT PPSSPTTSNV RNSPREETQF SSSSSSSWFQ WIKTPSQRPS
601: ASFTENDQDP FAIPRGYNWI TSEEKKKKIQ EKNKAKKSKS AQNS

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.