Factsheet for GSMUA_Achr4P26640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P13140_001	Banana	mitochondrion	77.87	88.47
GSMUA_Achr1P01140_001	Banana	cytosol	71.71	78.79
EER98424	Sorghum	cytosol	79.53	73.43
Os07t0436100-01	Rice	cytosol	79.2	72.56
Zm00001d019522_P001	Maize	cytosol	78.37	72.02
Zm00001d005442_P001	Maize	cytosol	77.87	71.23
TraesCS2A01G237500.1	Wheat	cytosol	76.04	69.77
TraesCSU01G145200.1	Wheat	cytosol	75.54	69.31
TraesCS2D01G236000.1	Wheat	cytosol	75.37	68.95
VIT_05s0136g00240.t01	Wine grape	cytosol	74.04	68.25
PGSC0003DMT400076190	Potato	cytosol	72.05	66.41
Solyc09g091560.2.1	Tomato	cytosol	71.88	66.26
KRH33461	Soybean	cytosol	70.05	64.87
KRG90233	Soybean	cytosol	69.88	64.71
HORVU2Hr1G052030.1	Barley	cytosol	10.65	63.37
CDY18256	Canola	cytosol	67.72	63.2
CDX89790	Canola	cytosol	66.22	62.78
Bra015348.1-P	Field mustard	cytosol	67.39	61.93
AT1G04780.1	Thale cress	cytosol	68.39	61.9
CDX85149	Canola	nucleus, plastid	59.9	60.91
AT3G24210.1	Thale cress	nucleus	59.73	59.14
CDY45348	Canola	cytosol	54.24	56.4
GSMUA_Achr10P...	Banana	nucleus	56.24	55.05
GSMUA_Achr11P...	Banana	nucleus	58.57	54.91
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	48.25	52.06
KRG90235	Soybean	nucleus	47.09	51.64
GSMUA_Achr2P13940_001	Banana	cytosol	42.26	44.33
CDX77466	Canola	plastid	56.57	31.69
Bra015003.1-P	Field mustard	cytosol, plastid	57.9	31.18

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr4G26640_001	EnsemblPlants:GSMUA_Achr4P26640_001	EnsemblPlants:GSMUA_Achr4T26640_001
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0SSC6	PFAM:PF11904	PFAM:PF13857
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI000294ACA1	SEG:seg	:	:	:	:

Description

ankyrin repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G26640_001]

Coordinates

chr4:-:25854940..25859051

Molecular Weight (calculated)

67395.3 Da

IEP (calculated)

8.340

GRAVY (calculated)

-0.530

Length

601 amino acids

Sequence
(BLAST)

001: MAGVDPTKYA HSPAHKAVLA RDYAGLKCVL AALPRLAEPL SIVTEAAAVA EEEKADAISA VIDRRDVPGR ETPLHLAVRL GDAAAVEMLM AAGVDWSLQN
101: EQGWSALQEA ICFREENLAK IIVRHYQPLA WAKWCRRLPR LVATMRRMRD FYMEITFHFE SSVIPFISRI APSDTYKIWK RGSNLRADMT LAGFDGFRIQ
201: RSDQSVLFLG DGSEDGKVSP GSLCMISHKD KEVMNALDGA GTPATEAEVQ QEVAAMSQTN IFRPGIDVTQ AVLLPQLTWR RQERSELVGS WKAKVYDMHH
301: VVVSVKSRQV PGAMTDEEFL STCNDNDTES EGLEDILTEE ERKQLENALK MESPDEAQHS RQDRKSWFGN WKKRGGNHKQ EGQKKVVPPR SSLCVEEKVS
401: DLLGDSPSGR GRDRDSKRTV TGLENGYRRK ESSKESEYKK GLRPVLWLSS DFPLRTEELL PLLDILANKV KAIRRLRDLL TTKLPAGAFP VKVAIPVVPT
501: IRVLVTFTKF EELQPLEEFS TPPSSPESNS PETLQSSSWI QWIKAPYRQG YSATSGPSSR VEDIQDPFVI PPDYIWTTPE AKKKKIQENK SKSKKGKGQN
601: Q

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.