CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019522_P001	Maize	cytosol	94.62	94.19
Zm00001d005442_P001	Maize	cytosol	93.24	92.39
Os07t0436100-01	Rice	cytosol	92.17	91.46
TraesCS2A01G237500.1	Wheat	cytosol	86.94	86.41
TraesCS2D01G236000.1	Wheat	cytosol	86.48	85.69
TraesCSU01G145200.1	Wheat	cytosol	86.02	85.5
HORVU2Hr1G052030.1	Barley	cytosol	12.9	83.17
GSMUA_Achr5P13140_001	Banana	mitochondrion	66.67	82.04
GSMUA_Achr4P26640_001	Banana	cytosol	73.43	79.53
GSMUA_Achr1P01140_001	Banana	cytosol	61.9	73.67
VIT_05s0136g00240.t01	Wine grape	cytosol	71.43	71.32
Solyc09g091560.2.1	Tomato	cytosol	68.66	68.56
PGSC0003DMT400076190	Potato	cytosol	68.51	68.4
KRG90233	Soybean	cytosol	66.97	67.18
KRH33461	Soybean	cytosol	66.05	66.26
CDY18256	Canola	cytosol	63.9	64.6
CDX89790	Canola	cytosol	62.06	63.72
AT1G04780.1	Thale cress	cytosol	64.82	63.55
CDX85149	Canola	nucleus, plastid	57.3	63.11
Bra015348.1-P	Field mustard	cytosol	63.29	63.0
AT3G24210.1	Thale cress	nucleus	57.14	61.28
CDY45348	Canola	cytosol	52.53	59.17
EES05988	Sorghum	nucleus	54.84	56.58
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	43.32	50.63
KRG90235	Soybean	nucleus	41.94	49.82
EER99440	Sorghum	plastid	36.71	38.86
CDX77466	Canola	plastid	54.84	33.27
Bra015003.1-P	Field mustard	cytosol, plastid	56.68	33.06

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	EntrezGene:8059730	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	UniProt:C5X501	EnsemblPlants:EER98424	ProteinID:EER98424	ProteinID:EER98424.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF11904	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	EnsemblPlantsGene:SORBI_3002G119700	SUPFAM:SSF48403	UniParc:UPI0001A84088	RefSeq:XP_002461903.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:15100401..15105204

Molecular Weight (calculated)

72996.5 Da

IEP (calculated)

8.285

GRAVY (calculated)

-0.608

Length

651 amino acids

Sequence
(BLAST)

001: MAGVDAARYA HSPAHHAVAA RDHAALRRVL DALPRARRPE EIRTEADSVA EEARAEAVSA VIDRRDVPGR ETPLHLAVRL CDATAVEMLM AAGADWSLQN
101: EQGWSALQEA ICAREEALAR VIVRHYQPLA WAKWCRRLPR VVATMRRMRD FYMEITFHFE SSVIPFISRI APSDTYRVWK RGANLRADMT LAGFDGFKIQ
201: RSDQTILFLG EGSEDGKVPP GSLCMINHKD KEIMNALEGA GAPASEAEVQ QEVTAMSQTN IFRPGIDVTQ AVLLPQLTWR RQERTEAVGP WKAKVYDMNH
301: VVVSVKSRRV PGAMTDEEFF SSCNDNDTES EGFDDVLTEE EKKQLEAALK MDSPDAGGES DSFAGPRHSC VEPREREIPI EDMSVSGNGE SKHDKKGWFS
401: SWGKRSQVSK PEGVKKMAPP RSSLCIDEKV SDLLIESPSN VQTRPGRHSV DVVRADDNRR IRERDNRRHV ASAENGRRRE GSKESEYKKG LRPVLWLSPN
501: FPLRTEELLP LLDILANKVK AIRRLRDLLT TKLPPGTFPV KVAIPVVPTI RVLVTFTKFE ELQPLEEFTT PPSSPDNSKS PAVQPSSNSW IQWIKAPYRQ
601: NFSTAPGPSS RVEDIQDPFA IPSDYVWTTP EEKKKKTQEN KSKSKKGRNG A

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.