CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021613_P001	Maize	plastid	91.87	91.87
TraesCS2A01G224100.1	Wheat	plastid	84.72	86.26
HORVU2Hr1G046900.2	Barley	plastid	83.74	85.98
TraesCS2B01G274300.1	Wheat	plastid	84.23	85.62
TraesCS2D01G230400.1	Wheat	plastid	83.9	85.43
Os07t0512100-01	Rice	plastid	81.79	82.06
GSMUA_Achr2P13940_001	Banana	cytosol	48.29	51.83
KRH51100	Soybean	cytosol	43.09	46.65
KRH11439	Soybean	nucleus	44.55	46.52
KRH36464	Soybean	plastid	43.74	46.46
KRH02059	Soybean	cytosol	42.44	46.44
CDY07249	Canola	cytosol, plastid	41.95	45.34
VIT_10s0116g01680.t01	Wine grape	nucleus	42.93	45.05
CDY24874	Canola	cytosol	42.28	44.07
VIT_00s1428g00010.t01	Wine grape	cytosol, plastid	15.45	43.98
Bra034461.1-P	Field mustard	cytosol	42.11	43.9
Solyc02g080610.2.1	Tomato	cytosol	41.63	43.76
PGSC0003DMT400042419	Potato	extracellular, plasma membrane, plastid	9.43	42.65
AT1G62050.1	Thale cress	cytosol, nucleus, plastid	42.28	41.67
Bra016817.1-P	Field mustard	cytosol	34.8	41.63
CDY21008	Canola	cytosol	34.31	41.05
Bra019833.1-P	Field mustard	cytosol	37.72	40.7
PGSC0003DMT400042418	Potato	cytosol, plastid	29.92	39.91
CDY31210	Canola	nucleus	33.5	39.69
CDX97982	Canola	cytosol, nucleus, peroxisome	38.21	36.78
EES05988	Sorghum	nucleus	37.72	36.77
EER98424	Sorghum	cytosol	38.86	36.71
AT1G11740.1	Thale cress	cytosol	37.72	36.02
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	37.89	24.07

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	EntrezGene:8080737	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	UniProt:C5X9Y9	EnsemblPlants:EER99440	ProteinID:EER99440	ProteinID:EER99440.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF11904	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR12447	PANTHER:PTHR12447:SF7	EnsemblPlantsGene:SORBI_3002G315500	SUPFAM:SSF48403	UniParc:UPI0001A8405E	RefSeq:XP_002462919.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:68900042..68903380

Molecular Weight (calculated)

66607.0 Da

IEP (calculated)

10.029

GRAVY (calculated)

-0.340

Length

615 amino acids

Sequence
(BLAST)

001: MPVQDPSSSP SAAGGGGGAR AKRTSSAPIR PADYAHSPTH HFVALRDAAG LQAILAGLPP LAHPSRVLTA ADAAREARLA SSVAAALDRR DVPGGDTALH
101: LAVRLRLPSL ASALAAAGAD PTLQNHAGWT PLQEALCLGC REIAACLLRA HRLAAWAKLR RRAPALSTAL RRVQDFYLEV DFHFESSVVP LLSRAAPSDT
201: YRIWKRGADL RADTTLAGFD GLRIRRADHS FLFFGEETSA GGRRLPPGSL LVLHRGRREV HDAFAAAAAA GDEDAATSDA AAYRPGLNIS SARLVPRTTW
301: LRKEKTENVG EWKARVFDVH NVVFSFRTLK AASAGRKDFT FELAGDEDGD EDDDEFLPLE IRDDDEDGDF LVADIPPPPA RRSCYVPGRR SVAGPPSHMG
401: TPQRRRNSVD VPRRLPACAS VGRGEDGIFG RHPGTTTTGG AKWKEEETVK TLRPSVWLTE DFPLSVDEFL PLLDILASRV RAVRRLRELL TTKFPPGTFP
501: VKVAIPVVPT VRVVITFTKF VPLVEPEEFF TPMSSPSLLA SPGPGSIMAK PDTHKSSYLR WGSKNSRPKA VNLSQVADNA DPFTVPSDYT WVNSLGSKNH
601: DKKSSKSKKG KTKET

Best Arabidopsis Sequence Match ( AT1G62050.1 )
(BLAST)

001: MARPSSASAT TAIRPEDYSH SPVHYAVVLG DHGALTRLLS SLPKLGDPEQ IRTESDSLSQ ERVADQISAV LDRRDVPSRE TPLHLAVRLD DLFAARAISS
101: AGGDISLQNA SGWNPLQEAF CRRNSEVMKV LLRHHHRLAW CKWRRRLPRL IAVLRRMRDF YMEISFHFES SVIPFVGKIA PSDTYKIWKR DGNLRADTTL
201: AGFDGLKIQR ADQSFLFLGD GDESLDISPG SLLVLNRDDR KILDAFESAG APISDSDIAG FCSQSSLYRP GMDVTKAELV GRTNWRRQEK MENVGEWKAR
301: VYEIQKVTFS FRSRKIVTGD GSEQVLPLEL DEDDEGFLVA ENPSFLAPPP RSQRRHSSFV KEDRDWISVG RKSVDVYPSA APPPPRQSQS PRRSVSQFQP
401: PRRSMAQVQP PRRSVAQAQP PRRSVALPST VSPVNPPPSP QIKEKEFVKS LHPSVWLTEQ FPLKTEELLP LLDILANKVK AVARMRDLLT TKFPPGTFPV
501: KLSIPVVPTV KVVITFTKFV ELPPAETFYT PLSSPRFLYS ATAGEEDHSD GEKPDARNSI SRPSTWLRLA TGKGSHRRVE EEEQQTPDPF AIPIGYKWTS
601: MSSSNSKSGN SSKMKKSKST KRTK

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q94CF4]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.