Factsheet for TraesCS2A01G224100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G230400.1	Wheat	plastid	98.51	98.51
TraesCS2B01G274300.1	Wheat	plastid	98.51	98.35
HORVU2Hr1G046900.2	Barley	plastid	96.03	96.83
Os07t0512100-01	Rice	plastid	86.59	85.32
Zm00001d021613_P001	Maize	plastid	86.42	84.88
EER99440	Sorghum	plastid	86.26	84.72
GSMUA_Achr2P13940_001	Banana	cytosol	49.01	51.66
KRH51100	Soybean	cytosol	44.37	47.18
KRH02059	Soybean	cytosol	43.87	47.15
KRH36464	Soybean	plastid	44.87	46.8
KRH11439	Soybean	nucleus	44.87	46.01
VIT_10s0116g01680.t01	Wine grape	nucleus	44.21	45.56
CDY07249	Canola	cytosol, plastid	42.05	44.64
CDY24874	Canola	cytosol	42.88	43.9
Bra034461.1-P	Field mustard	cytosol	42.72	43.73
Solyc02g080610.2.1	Tomato	cytosol	41.89	43.25
VIT_00s1428g00010.t01	Wine grape	cytosol, plastid	15.4	43.06
Bra016817.1-P	Field mustard	cytosol	35.6	41.83
AT1G62050.1	Thale cress	cytosol, nucleus, plastid	42.88	41.51
CDY21008	Canola	cytosol	35.26	41.44
CDY31210	Canola	nucleus	34.6	40.27
Bra019833.1-P	Field mustard	cytosol	37.91	40.18
PGSC0003DMT400042419	Potato	extracellular, plasma membrane, plastid	8.94	39.71
PGSC0003DMT400042418	Potato	cytosol, plastid	30.3	39.7
TraesCS6A01G379500.1	Wheat	nucleus	38.58	36.98
AT1G11740.1	Thale cress	cytosol	38.91	36.49
CDX97982	Canola	cytosol, nucleus, peroxisome	38.41	36.31
TraesCS2A01G237500.1	Wheat	cytosol	38.91	35.88
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	38.08	23.76

Protein Annotations

EnsemblPlants:TraesCS2A01G224100.1	EnsemblPlantsGene:TraesCS2A01G224100	Gene3D:1.25.40.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	PANTHER:PTHR12447	PANTHER:PTHR12447:SF7	PFAM:PF11904	PFscan:PS50088	PFscan:PS50297
SEG:seg	SUPFAM:SSF48403	TIGR:cd00204	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr2A:+:222191660..222194117

Molecular Weight (calculated)

65797.4 Da

IEP (calculated)

10.156

GRAVY (calculated)

-0.311

Length

604 amino acids

Sequence
(BLAST)

001: MSVQDPSPMP LPAAARPKRT SSAPIRPSDY AHSPAHHCVA LRDAAGLSAI LAGLPPLAHP SRILSAADAA REARLSASVS AALDRRDVPG GDTALHLAVR
101: LRLPSLASAL AAAGADPTLQ NHAGWTPLQE ALCLGCKDIA ALLLRAHRLA AWAKLRRRAP ALSAALRRVQ DFYLEVDFHF ESSVVPLLSR AAPSDTYRIW
201: KCGANLRADT TLAGFDGLRI RRADHSFLFF GEETEAGGRR LPPGSLLVLH RGKREVHDAF AAAAAAGDED AATSDAAAYR PGLNITSARL VPRTTWLRKE
301: KTESVGEWKA RVFDVHNVVF SFRTLKAAST GRKDLTFELA GEDDEEFLPL EIRDDDEDGD FLVADIPPPP PRRSCYVPGR RSVAGPPSHM GTPQRRRNSV
401: DVPRRLPTCA SVGRGEDGVF SRNATTGGAK WKEEETVKTL RPTVWLTEDF PLSVDEFLPL LDILATRVRA VRRLRELLTT KFPTGTFPVK VAIPVVPTVR
501: VVITFNKFVP LVEPEEFFTP MSSPSLLASP GPGSIMPKPD THKSSYLRWT SKNSRAKPVN LSQVADNTDP FTIPSDYTWV NLGSTKTQDK KSSKTSKKGK
601: SKET

Best Arabidopsis Sequence Match ( AT1G11740.1 )
(BLAST)

001: MARSSPANIP ATTIDDYAHS PVHYAVVVGD HAGLTRLVSS LPKLTDPEQI HTESDSMSQE RVAEKISTVI DRRDVPFGET PLHLAVRLGD VFAAKTISSA
101: GADITLQNAA GWNSLHEALC RRNSEITEAI LRDHHRSAWC KWRRRLPHLI AVLSRMRDFY MEISFHFESS VIPFVGKIAP SDTYKIWKRG GDLRADTSLA
201: GFDGFKIRRA NQSFLFLSDG DEFLDVSPGT LLVLNRDDKT ILNAFENAKD PISDSDIAGF CGQSSLYRPG MDVTKAKLVE ITNWRRQAKI ETVGEWKAKA
301: YDVENVSFSF KSRKVGKEQG LRLDETRRSV SEPLRPQRRE QRRRSVSLPE AAILVANSSV GRIKEKEIVK SLRPSVWLTD QFPLKTEELL PLLDILANHV
401: KAVRRMRELL TTKFPAGTFP VKLSIPVIPT VKVVMTFSKF VALPPLDEFY TPLSSPKHLL AAMEDQHDVH DDEKLDRRIS SSRPSFSTPS WLRLNINATG
501: KSSRRRLVDE EQVVDPFTIP TGYKWTSNSD NSVYILHIST YLAHPKSVIL SLVFTKKSSK NQRYIRYWDH YKMASEAPSW ADQWGTGGIG VMAAEETTDG
601: KKDVTGKKSG KTKAGINKAK IVVFIGVNWM KNLVQRKKKD STSS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4IAG4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.