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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • mitochondrion 2
  • nucleus 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400025373 Potato nucleus 33.82 34.07
VIT_00s1428g00010.t01 Wine grape cytosol, plastid 52.21 32.87
CDY31210 Canola nucleus 42.65 11.18
CDY21008 Canola cytosol 41.91 11.09
Bra016817.1-P Field mustard cytosol 41.18 10.89
Bra019833.1-P Field mustard cytosol 44.12 10.53
GSMUA_Achr2P13940_001 Banana cytosol 41.91 9.95
CDX97982 Canola cytosol, nucleus, peroxisome 46.32 9.86
Os07t0512100-01 Rice plastid 44.12 9.79
AT1G11740.1 Thale cress cytosol 46.32 9.78
EER99440 Sorghum plastid 42.65 9.43
Zm00001d021613_P001 Maize plastid 41.18 9.11
HORVU2Hr1G046900.2 Barley plastid 39.71 9.02
TraesCS2A01G224100.1 Wheat plastid 39.71 8.94
TraesCS2D01G230400.1 Wheat plastid 39.71 8.94
TraesCS2B01G274300.1 Wheat plastid 39.71 8.93
PGSC0003DMT400060183 Potato nucleus 41.18 8.51
PGSC0003DMT400076190 Potato cytosol 39.71 8.28
CDY49802 Canola endoplasmic reticulum, peroxisome, plasma membrane 42.65 5.99
PGSC0003DMT400025371 Potato cytosol 16.18 3.62
PGSC0003DMT400042418 Potato cytosol, plastid 5.15 1.52
Protein Annotations
EnsemblPlants:PGSC0003DMT400042419EnsemblPlantsGene:PGSC0003DMG402016449InterPro:ANKRD13PANTHER:PTHR12447PANTHER:PTHR12447:SF7PFAM:PF11904
PGSC:PGSC0003DMG402016449SEG:segUniParc:UPI000295A5D7UniProt:M1BD01MapMan:35.2:
Description
Ankyrin repeat family protein [Source:PGSC_GENE;Acc:PGSC0003DMG402016449]
Coordinates
chr2:-:36402101..36402741
Molecular Weight (calculated)
15144.8 Da
IEP (calculated)
10.287
GRAVY (calculated)
-0.600
Length
136 amino acids
Sequence
(BLAST)
001: MRELLTTKFP PGTFPVKLAI PVVPTVRVVI TFTKFVELQP IEQFYTPFSS PRHLLHGDDA EDESSGNNYY SLPSSSSSSW LSRSNSRSCS SSKLSQQSCN
101: GAQQADPFAI PGGYSWSSFD VKNRKMKKSK STRKTK
Best Arabidopsis Sequence Match ( AT1G11740.1 )
(BLAST)
001: MARSSPANIP ATTIDDYAHS PVHYAVVVGD HAGLTRLVSS LPKLTDPEQI HTESDSMSQE RVAEKISTVI DRRDVPFGET PLHLAVRLGD VFAAKTISSA
101: GADITLQNAA GWNSLHEALC RRNSEITEAI LRDHHRSAWC KWRRRLPHLI AVLSRMRDFY MEISFHFESS VIPFVGKIAP SDTYKIWKRG GDLRADTSLA
201: GFDGFKIRRA NQSFLFLSDG DEFLDVSPGT LLVLNRDDKT ILNAFENAKD PISDSDIAGF CGQSSLYRPG MDVTKAKLVE ITNWRRQAKI ETVGEWKAKA
301: YDVENVSFSF KSRKVGKEQG LRLDETRRSV SEPLRPQRRE QRRRSVSLPE AAILVANSSV GRIKEKEIVK SLRPSVWLTD QFPLKTEELL PLLDILANHV
401: KAVRRMRELL TTKFPAGTFP VKLSIPVIPT VKVVMTFSKF VALPPLDEFY TPLSSPKHLL AAMEDQHDVH DDEKLDRRIS SSRPSFSTPS WLRLNINATG
501: KSSRRRLVDE EQVVDPFTIP TGYKWTSNSD NSVYILHIST YLAHPKSVIL SLVFTKKSSK NQRYIRYWDH YKMASEAPSW ADQWGTGGIG VMAAEETTDG
601: KKDVTGKKSG KTKAGINKAK IVVFIGVNWM KNLVQRKKKD STSS
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4IAG4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.