Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 2
- nucleus 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400025373 | Potato | nucleus | 33.82 | 34.07 |
VIT_00s1428g00010.t01 | Wine grape | cytosol, plastid | 52.21 | 32.87 |
CDY31210 | Canola | nucleus | 42.65 | 11.18 |
CDY21008 | Canola | cytosol | 41.91 | 11.09 |
Bra016817.1-P | Field mustard | cytosol | 41.18 | 10.89 |
Bra019833.1-P | Field mustard | cytosol | 44.12 | 10.53 |
GSMUA_Achr2P13940_001 | Banana | cytosol | 41.91 | 9.95 |
CDX97982 | Canola | cytosol, nucleus, peroxisome | 46.32 | 9.86 |
Os07t0512100-01 | Rice | plastid | 44.12 | 9.79 |
AT1G11740.1 | Thale cress | cytosol | 46.32 | 9.78 |
EER99440 | Sorghum | plastid | 42.65 | 9.43 |
Zm00001d021613_P001 | Maize | plastid | 41.18 | 9.11 |
HORVU2Hr1G046900.2 | Barley | plastid | 39.71 | 9.02 |
TraesCS2A01G224100.1 | Wheat | plastid | 39.71 | 8.94 |
TraesCS2D01G230400.1 | Wheat | plastid | 39.71 | 8.94 |
TraesCS2B01G274300.1 | Wheat | plastid | 39.71 | 8.93 |
PGSC0003DMT400060183 | Potato | nucleus | 41.18 | 8.51 |
PGSC0003DMT400076190 | Potato | cytosol | 39.71 | 8.28 |
CDY49802 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 42.65 | 5.99 |
PGSC0003DMT400025371 | Potato | cytosol | 16.18 | 3.62 |
PGSC0003DMT400042418 | Potato | cytosol, plastid | 5.15 | 1.52 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400042419 | EnsemblPlantsGene:PGSC0003DMG402016449 | InterPro:ANKRD13 | PANTHER:PTHR12447 | PANTHER:PTHR12447:SF7 | PFAM:PF11904 |
PGSC:PGSC0003DMG402016449 | SEG:seg | UniParc:UPI000295A5D7 | UniProt:M1BD01 | MapMan:35.2 | : |
Description
Ankyrin repeat family protein [Source:PGSC_GENE;Acc:PGSC0003DMG402016449]
Coordinates
chr2:-:36402101..36402741
Molecular Weight (calculated)
15144.8 Da
IEP (calculated)
10.287
GRAVY (calculated)
-0.600
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MRELLTTKFP PGTFPVKLAI PVVPTVRVVI TFTKFVELQP IEQFYTPFSS PRHLLHGDDA EDESSGNNYY SLPSSSSSSW LSRSNSRSCS SSKLSQQSCN
101: GAQQADPFAI PGGYSWSSFD VKNRKMKKSK STRKTK
101: GAQQADPFAI PGGYSWSSFD VKNRKMKKSK STRKTK
001: MARSSPANIP ATTIDDYAHS PVHYAVVVGD HAGLTRLVSS LPKLTDPEQI HTESDSMSQE RVAEKISTVI DRRDVPFGET PLHLAVRLGD VFAAKTISSA
101: GADITLQNAA GWNSLHEALC RRNSEITEAI LRDHHRSAWC KWRRRLPHLI AVLSRMRDFY MEISFHFESS VIPFVGKIAP SDTYKIWKRG GDLRADTSLA
201: GFDGFKIRRA NQSFLFLSDG DEFLDVSPGT LLVLNRDDKT ILNAFENAKD PISDSDIAGF CGQSSLYRPG MDVTKAKLVE ITNWRRQAKI ETVGEWKAKA
301: YDVENVSFSF KSRKVGKEQG LRLDETRRSV SEPLRPQRRE QRRRSVSLPE AAILVANSSV GRIKEKEIVK SLRPSVWLTD QFPLKTEELL PLLDILANHV
401: KAVRRMRELL TTKFPAGTFP VKLSIPVIPT VKVVMTFSKF VALPPLDEFY TPLSSPKHLL AAMEDQHDVH DDEKLDRRIS SSRPSFSTPS WLRLNINATG
501: KSSRRRLVDE EQVVDPFTIP TGYKWTSNSD NSVYILHIST YLAHPKSVIL SLVFTKKSSK NQRYIRYWDH YKMASEAPSW ADQWGTGGIG VMAAEETTDG
601: KKDVTGKKSG KTKAGINKAK IVVFIGVNWM KNLVQRKKKD STSS
101: GADITLQNAA GWNSLHEALC RRNSEITEAI LRDHHRSAWC KWRRRLPHLI AVLSRMRDFY MEISFHFESS VIPFVGKIAP SDTYKIWKRG GDLRADTSLA
201: GFDGFKIRRA NQSFLFLSDG DEFLDVSPGT LLVLNRDDKT ILNAFENAKD PISDSDIAGF CGQSSLYRPG MDVTKAKLVE ITNWRRQAKI ETVGEWKAKA
301: YDVENVSFSF KSRKVGKEQG LRLDETRRSV SEPLRPQRRE QRRRSVSLPE AAILVANSSV GRIKEKEIVK SLRPSVWLTD QFPLKTEELL PLLDILANHV
401: KAVRRMRELL TTKFPAGTFP VKLSIPVIPT VKVVMTFSKF VALPPLDEFY TPLSSPKHLL AAMEDQHDVH DDEKLDRRIS SSRPSFSTPS WLRLNINATG
501: KSSRRRLVDE EQVVDPFTIP TGYKWTSNSD NSVYILHIST YLAHPKSVIL SLVFTKKSSK NQRYIRYWDH YKMASEAPSW ADQWGTGGIG VMAAEETTDG
601: KKDVTGKKSG KTKAGINKAK IVVFIGVNWM KNLVQRKKKD STSS
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4IAG4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.