CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019833.1-P	Field mustard	cytosol	81.85	91.75
AT1G11740.1	Thale cress	cytosol	71.99	71.43
CDY21008	Canola	cytosol	55.24	68.68
CDY31210	Canola	nucleus	55.09	67.82
CDY07249	Canola	cytosol, plastid	52.58	59.05
CDY24874	Canola	cytosol	52.74	57.12
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	75.59	49.9
VIT_00s1428g00010.t01	Wine grape	cytosol, plastid	16.43	48.61
PGSC0003DMT400042419	Potato	extracellular, plasma membrane, plastid	9.86	46.32
GSMUA_Achr2P13940_001	Banana	cytosol	41.47	46.25
CDX85149	Canola	nucleus, plastid	38.5	41.62
CDY48669	Canola	nucleus	40.06	40.96
CDX86213	Canola	nucleus	39.91	40.73
CDX89790	Canola	cytosol	38.34	38.64
CDY45348	Canola	cytosol	34.9	38.58
TraesCS2A01G224100.1	Wheat	plastid	36.31	38.41
HORVU2Hr1G046900.2	Barley	plastid	35.99	38.4
CDY18256	Canola	cytosol	38.65	38.35
EER99440	Sorghum	plastid	36.78	38.21
TraesCS2B01G274300.1	Wheat	plastid	36.15	38.18
TraesCS2D01G230400.1	Wheat	plastid	35.84	37.91
Zm00001d021613_P001	Maize	plastid	36.46	37.89
Os07t0512100-01	Rice	plastid	36.31	37.85
CDY00019	Canola	mitochondrion	41.0	37.32
CDY57011	Canola	nucleus, plastid	40.53	37.05
CDX77466	Canola	plastid	39.28	23.39

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlants:CDX97982	ProteinID:CDX97982	ProteinID:CDX97982.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00105338001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF11904	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF7	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0004EEF76C
SEG:seg	:	:	:	:	:

Description

BnaA06g07330D

Coordinates

chrLK031902:-:352032..355170

Molecular Weight (calculated)

71462.7 Da

IEP (calculated)

9.851

GRAVY (calculated)

-0.448

Length

639 amino acids

Sequence
(BLAST)

001: MAKSSPVKIP ATSLEDYAHS PFHYAVVLGD HVGLTRLVSS LPKLTEPEQI HTESDSASQE RLAEQISASI DRRDVPLRET PLHLAVRIGD VFAAETISSA
101: GADITLQNAA GWSPLHEALC RRNAEITETV LRHQRRSAWC KWRRRLPHLI AVLRRMRDFY MEISFHFESS VIPFVGKIAP SDTYRIWKRG GDLRADTSLA
201: GFDRFKIRRA SQSFLFLGDG DEFLDVAPGT LLVLNRDDKT ISNAFENAND PISDGEIAGF CSRTSLYRPG MDVTKAELVE MTNWRRQVKT ETVGEWRAKG
301: YEVANVSFSF KSRRVRRQHG CSNVEEKEFQ PSSSSRRSRK SVSLPAEGVS VAGSVPRIKE KEYVKSLSPS VWLTEDFPLK TEELLPLLDI LANHVKAVRR
401: MRELLTAKFP PGTFPVKLSI PVIPTVKVVV TFSKFVPLRP IDQFYTPLSS PRHLSAAVED QCDVESEETS DIGTSTSSRS SFSTSSWRRL SITGTGKSAQ
501: RRLEEEQAQM VDPFSIATGY KWTSNSDKSG NESNHLLHSL FTYFSSMHNY MNPYGGLNTI LFDRNRMASE APSWADQWGN GGIGVMAAKE ETTDGKKDAS
601: GKKSSKAKAG FNRAKMVAFI GVNWMKNLVH RKKKDATSS

Best Arabidopsis Sequence Match ( AT1G11740.1 )
(BLAST)

001: MARSSPANIP ATTIDDYAHS PVHYAVVVGD HAGLTRLVSS LPKLTDPEQI HTESDSMSQE RVAEKISTVI DRRDVPFGET PLHLAVRLGD VFAAKTISSA
101: GADITLQNAA GWNSLHEALC RRNSEITEAI LRDHHRSAWC KWRRRLPHLI AVLSRMRDFY MEISFHFESS VIPFVGKIAP SDTYKIWKRG GDLRADTSLA
201: GFDGFKIRRA NQSFLFLSDG DEFLDVSPGT LLVLNRDDKT ILNAFENAKD PISDSDIAGF CGQSSLYRPG MDVTKAKLVE ITNWRRQAKI ETVGEWKAKA
301: YDVENVSFSF KSRKVGKEQG LRLDETRRSV SEPLRPQRRE QRRRSVSLPE AAILVANSSV GRIKEKEIVK SLRPSVWLTD QFPLKTEELL PLLDILANHV
401: KAVRRMRELL TTKFPAGTFP VKLSIPVIPT VKVVMTFSKF VALPPLDEFY TPLSSPKHLL AAMEDQHDVH DDEKLDRRIS SSRPSFSTPS WLRLNINATG
501: KSSRRRLVDE EQVVDPFTIP TGYKWTSNSD NSVYILHIST YLAHPKSVIL SLVFTKKSSK NQRYIRYWDH YKMASEAPSW ADQWGTGGIG VMAAEETTDG
601: KKDVTGKKSG KTKAGINKAK IVVFIGVNWM KNLVQRKKKD STSS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4IAG4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.