CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016817.1-P	Field mustard	cytosol	95.91	95.91
CDY31210	Canola	nucleus	80.35	79.58
CDX97982	Canola	cytosol, nucleus, peroxisome	68.68	55.24
AT1G11740.1	Thale cress	cytosol	64.2	51.24
CDY07249	Canola	cytosol, plastid	56.42	50.97
CDY24874	Canola	cytosol	57.0	49.66
VIT_00s1428g00010.t01	Wine grape	cytosol, plastid	17.7	42.13
PGSC0003DMT400042419	Potato	extracellular, plasma membrane, plastid	11.09	41.91
GSMUA_Achr2P13940_001	Banana	cytosol	44.94	40.31
CDX85149	Canola	nucleus, plastid	43.97	38.24
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	67.7	35.95
CDY48669	Canola	nucleus	43.58	35.84
CDX86213	Canola	nucleus	43.39	35.62
TraesCS2A01G224100.1	Wheat	plastid	41.44	35.26
Os07t0512100-01	Rice	plastid	42.02	35.24
HORVU2Hr1G046900.2	Barley	plastid	40.86	35.06
TraesCS2B01G274300.1	Wheat	plastid	41.25	35.04
TraesCS2D01G230400.1	Wheat	plastid	40.66	34.6
CDY45348	Canola	cytosol	38.91	34.6
EER99440	Sorghum	plastid	41.05	34.31
Zm00001d021613_P001	Maize	plastid	40.86	34.15
CDX89790	Canola	cytosol	41.83	33.91
CDY18256	Canola	cytosol	42.02	33.54
CDY00019	Canola	mitochondrion	43.58	31.91
CDY57011	Canola	nucleus, plastid	43.0	31.62
CDX77466	Canola	plastid	42.61	20.41

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	UniProt:A0A078G8K9	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY21008	ProteinID:CDY21008	ProteinID:CDY21008.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00015166001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF11904
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF7	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI0004EEABBF	SEG:seg	:	:	:	:

Description

BnaA08g25170DBnaA08g25170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8K9]

Coordinates

chrLK032115:-:307249..309188

Molecular Weight (calculated)

57501.7 Da

IEP (calculated)

9.768

GRAVY (calculated)

-0.362

Length

514 amino acids

Sequence
(BLAST)

001: MAKPSPVNKP TTTLDDYAHS PFHYAVVLGD HAGLIRLVSS LPKLTEPEQI HTESDSISQE RAAEIISAVI DRRDVPFRET PLHLAVRIGD VLAVKTLSSA
101: GADAALRNVA GWNALDEAVR RGNAEITEMI LRHQRRSAWC RWRRRLPCLI AVLERMRDFY VEVSISFESS VIPFFGKVAP SDTYRIWKQG GDLRADTSLT
201: GFDRFKIRRA NRRFLFLSDD DVSSSPGTLL VLNREDKTIS NAFENAGETV SEREMDVTKA ELVEMKNWRG KEKVETVGEW KAKRYEAKNV SFSLKSPKVA
301: VAAGETEKNS PSLTRQLSCS DVEEKEVQPS SLRRGRKSVS LPAAEVSVAG SVPRIKGKET VKSLSPLVWL TDDFPLTTEE LLPVLDILAI NVEAVRRMKE
401: LLTVKFPPGT FPVKMSIPVI PTVKVVITFS KFVALPSMDH FYTPVSSPSH ISAGVEDQCD VESDTRTSTS RRSFSWLRLK ATKKSSQRRL KKEQAQKEDP
501: FAIPAGYKWT SNTD

Best Arabidopsis Sequence Match ( AT1G11740.1 )
(BLAST)

001: MARSSPANIP ATTIDDYAHS PVHYAVVVGD HAGLTRLVSS LPKLTDPEQI HTESDSMSQE RVAEKISTVI DRRDVPFGET PLHLAVRLGD VFAAKTISSA
101: GADITLQNAA GWNSLHEALC RRNSEITEAI LRDHHRSAWC KWRRRLPHLI AVLSRMRDFY MEISFHFESS VIPFVGKIAP SDTYKIWKRG GDLRADTSLA
201: GFDGFKIRRA NQSFLFLSDG DEFLDVSPGT LLVLNRDDKT ILNAFENAKD PISDSDIAGF CGQSSLYRPG MDVTKAKLVE ITNWRRQAKI ETVGEWKAKA
301: YDVENVSFSF KSRKVGKEQG LRLDETRRSV SEPLRPQRRE QRRRSVSLPE AAILVANSSV GRIKEKEIVK SLRPSVWLTD QFPLKTEELL PLLDILANHV
401: KAVRRMRELL TTKFPAGTFP VKLSIPVIPT VKVVMTFSKF VALPPLDEFY TPLSSPKHLL AAMEDQHDVH DDEKLDRRIS SSRPSFSTPS WLRLNINATG
501: KSSRRRLVDE EQVVDPFTIP TGYKWTSNSD NSVYILHIST YLAHPKSVIL SLVFTKKSSK NQRYIRYWDH YKMASEAPSW ADQWGTGGIG VMAAEETTDG
601: KKDVTGKKSG KTKAGINKAK IVVFIGVNWM KNLVQRKKKD STSS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4IAG4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.