Factsheet for AT1G11740.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97982	Canola	cytosol, nucleus, peroxisome	71.43	71.99
Bra019833.1-P	Field mustard	cytosol	62.27	70.35
CDY31210	Canola	nucleus	52.64	65.32
CDY21008	Canola	cytosol	51.24	64.2
Bra016817.1-P	Field mustard	cytosol	50.31	63.03
AT1G62050.1	Thale cress	cytosol, nucleus, plastid	54.97	56.73
VIT_00s1428g00010.t01	Wine grape	cytosol, plastid	15.99	47.69
PGSC0003DMT400042419	Potato	extracellular, plasma membrane, plastid	9.78	46.32
GSMUA_Achr2P13940_001	Banana	cytosol	40.37	45.38
AT3G24210.1	Thale cress	nucleus	38.66	41.02
AT3G04470.1	Thale cress	nucleus	39.6	39.84
HORVU2Hr1G046900.2	Barley	plastid	36.49	39.23
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	58.85	39.15
TraesCS2A01G224100.1	Wheat	plastid	36.49	38.91
TraesCS2B01G274300.1	Wheat	plastid	36.49	38.84
Os07t0512100-01	Rice	plastid	36.65	38.5
TraesCS2D01G230400.1	Wheat	plastid	36.02	38.41
Zm00001d021613_P001	Maize	plastid	36.02	37.72
EER99440	Sorghum	plastid	36.02	37.72
AT1G04780.1	Thale cress	cytosol	37.42	36.3

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	EntrezGene:837718	UniProt:A0A178WN86	ProteinID:AEE28777.1	InterPro:ANKRD13
ArrayExpress:AT1G11740	EnsemblPlantsGene:AT1G11740	RefSeq:AT1G11740	TAIR:AT1G11740	RefSeq:AT1G11740-TAIR-G	EnsemblPlants:AT1G11740.1
TAIR:AT1G11740.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	Unigene:At.42113	UniProt:F4IAG4
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	RefSeq:NP_172639.2
ProteinID:OAP19694.1	PFAM:PF11904	PFAM:PF13637	PO:PO:0000084	PO:PO:0000230	PO:PO:0007611
PO:PO:0007616	PO:PO:0009005	PO:PO:0009046	PO:PO:0020100	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR12447	PANTHER:PTHR12447:SF7	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0001E92AC1	SEG:seg

Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4IAG4]

Coordinates

chr1:-:3963054..3966850

Molecular Weight (calculated)

72460.7 Da

IEP (calculated)

10.159

GRAVY (calculated)

-0.402

Length

644 amino acids

Sequence
(BLAST)

001: MARSSPANIP ATTIDDYAHS PVHYAVVVGD HAGLTRLVSS LPKLTDPEQI HTESDSMSQE RVAEKISTVI DRRDVPFGET PLHLAVRLGD VFAAKTISSA
101: GADITLQNAA GWNSLHEALC RRNSEITEAI LRDHHRSAWC KWRRRLPHLI AVLSRMRDFY MEISFHFESS VIPFVGKIAP SDTYKIWKRG GDLRADTSLA
201: GFDGFKIRRA NQSFLFLSDG DEFLDVSPGT LLVLNRDDKT ILNAFENAKD PISDSDIAGF CGQSSLYRPG MDVTKAKLVE ITNWRRQAKI ETVGEWKAKA
301: YDVENVSFSF KSRKVGKEQG LRLDETRRSV SEPLRPQRRE QRRRSVSLPE AAILVANSSV GRIKEKEIVK SLRPSVWLTD QFPLKTEELL PLLDILANHV
401: KAVRRMRELL TTKFPAGTFP VKLSIPVIPT VKVVMTFSKF VALPPLDEFY TPLSSPKHLL AAMEDQHDVH DDEKLDRRIS SSRPSFSTPS WLRLNINATG
501: KSSRRRLVDE EQVVDPFTIP TGYKWTSNSD NSVYILHIST YLAHPKSVIL SLVFTKKSSK NQRYIRYWDH YKMASEAPSW ADQWGTGGIG VMAAEETTDG
601: KKDVTGKKSG KTKAGINKAK IVVFIGVNWM KNLVQRKKKD STSS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.