Factsheet for VIT_00s1428g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400042419	Potato	extracellular, plasma membrane, plastid	32.87	52.21
VIT_10s0116g01680.t01	Wine grape	nucleus	68.52	25.26
CDY31210	Canola	nucleus	44.91	18.69
Bra019833.1-P	Field mustard	cytosol	47.22	17.89
CDY21008	Canola	cytosol	42.13	17.7
Bra016817.1-P	Field mustard	cytosol	40.74	17.12
GSMUA_Achr2P13940_001	Banana	cytosol	44.91	16.93
CDX97982	Canola	cytosol, nucleus, peroxisome	48.61	16.43
AT1G11740.1	Thale cress	cytosol	47.69	15.99
HORVU2Hr1G046900.2	Barley	plastid	43.06	15.53
EER99440	Sorghum	plastid	43.98	15.45
TraesCS2A01G224100.1	Wheat	plastid	43.06	15.4
Os07t0512100-01	Rice	plastid	43.52	15.33
TraesCS2D01G230400.1	Wheat	plastid	42.59	15.23
Zm00001d021613_P001	Maize	plastid	43.06	15.12
TraesCS2B01G274300.1	Wheat	plastid	42.13	15.04
VIT_14s0036g01030.t01	Wine grape	nucleus	44.91	14.7
VIT_05s0136g00240.t01	Wine grape	cytosol	43.98	14.57
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	44.44	9.92

Protein Annotations

ArrayExpress:VIT_00s1428g00010	EMBL:FN596858	EnsemblPlants:VIT_00s1428g00010.t01	EnsemblPlantsGene:VIT_00s1428g00010	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	InterPro:ANKRD13	PANTHER:PTHR12447	PANTHER:PTHR12447:SF7	PFAM:PF11904
ProteinID:CCB62954	ProteinID:CCB62954.1	RefSeq:XP_003635574	RefSeq:XP_003635574.1	SEG:seg	UniParc:UPI0002108F16
UniProt:F6I7N5	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:39116473..39117727

Molecular Weight (calculated)

24198.7 Da

IEP (calculated)

11.232

GRAVY (calculated)

-0.742

Length

216 amino acids

Sequence
(BLAST)

001: RKSVDIPSAA PDRRRLSPAV APPQTKEKEY LKSLRPSVWL TEQFPLKTEE LLPLLDILAN KVKAVRRMRE LLTTKFPPGT FPVKLAIPVV PTVRVVITFT
101: KFVELQSTEQ FYTPLSSPRY FGHGGRAQSE HSDTQHQSFS SSSTSTSTST STSSASAWLR RSNSQANSGS KNHHQRGPGP QQSEPFAMPN GYTWTSIIDD
201: NKSRKLKKSK SMRRSK

Best Arabidopsis Sequence Match ( AT1G62050.1 )
(BLAST)

001: MARPSSASAT TAIRPEDYSH SPVHYAVVLG DHGALTRLLS SLPKLGDPEQ IRTESDSLSQ ERVADQISAV LDRRDVPSRE TPLHLAVRLD DLFAARAISS
101: AGGDISLQNA SGWNPLQEAF CRRNSEVMKV LLRHHHRLAW CKWRRRLPRL IAVLRRMRDF YMEISFHFES SVIPFVGKIA PSDTYKIWKR DGNLRADTTL
201: AGFDGLKIQR ADQSFLFLGD GDESLDISPG SLLVLNRDDR KILDAFESAG APISDSDIAG FCSQSSLYRP GMDVTKAELV GRTNWRRQEK MENVGEWKAR
301: VYEIQKVTFS FRSRKIVTGD GSEQVLPLEL DEDDEGFLVA ENPSFLAPPP RSQRRHSSFV KEDRDWISVG RKSVDVYPSA APPPPRQSQS PRRSVSQFQP
401: PRRSMAQVQP PRRSVAQAQP PRRSVALPST VSPVNPPPSP QIKEKEFVKS LHPSVWLTEQ FPLKTEELLP LLDILANKVK AVARMRDLLT TKFPPGTFPV
501: KLSIPVVPTV KVVITFTKFV ELPPAETFYT PLSSPRFLYS ATAGEEDHSD GEKPDARNSI SRPSTWLRLA TGKGSHRRVE EEEQQTPDPF AIPIGYKWTS
601: MSSSNSKSGN SSKMKKSKST KRTK

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q94CF4]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.