Factsheet for VIT_14s0036g01030.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060183	Potato	nucleus	80.15	80.4
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	35.15	80.28
Solyc05g054970.2.1	Tomato	extracellular, nucleus	80.0	80.24
KRG92643	Soybean	cytosol	76.82	78.6
KRH68787	Soybean	nucleus	81.21	77.79
CDX86213	Canola	nucleus	69.09	72.84
GSMUA_Achr11P...	Banana	nucleus	70.61	72.7
GSMUA_Achr10P...	Banana	nucleus	66.82	71.82
EES05988	Sorghum	nucleus	68.33	71.47
Bra036125.1-P	Field mustard	nucleus	66.52	71.27
CDY48669	Canola	nucleus	67.27	71.04
AT3G04470.1	Thale cress	nucleus	68.79	70.94
Os02t0810100-00	Rice	plasma membrane	68.03	70.93
Zm00001d018443_P001	Maize	mitochondrion	67.58	70.68
PGSC0003DMT400025371	Potato	cytosol	65.0	70.68
Zm00001d051948_P001	Maize	cytosol	67.42	70.41
TraesCS6B01G417700.1	Wheat	nucleus	66.36	69.52
TraesCS6A01G379500.1	Wheat	nucleus	66.06	69.21
TraesCS6D01G363800.1	Wheat	nucleus	66.06	69.21
Bra010013.1-P	Field mustard	nucleus	67.73	68.98
KRH34141	Soybean	plastid	75.45	68.69
Solyc06g036630.1.1	Tomato	endoplasmic reticulum	15.3	66.45
PGSC0003DMT400025373	Potato	nucleus	13.48	65.93
Solyc06g036620.1.1	Tomato	cytosol, nucleus, plastid	61.67	64.91
CDY00019	Canola	mitochondrion	66.36	62.39
CDY57011	Canola	nucleus, plastid	66.06	62.37
KRG97040	Soybean	nucleus	26.97	57.79
HORVU6Hr1G089010.1	Barley	nucleus	64.7	56.11
VIT_05s0136g00240.t01	Wine grape	cytosol	54.09	54.75
VIT_10s0116g01680.t01	Wine grape	nucleus	40.91	46.08
VIT_00s1428g00010.t01	Wine grape	cytosol, plastid	14.7	44.91

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100242512	wikigene:100242512	MapMan:35.2	InterPro:ANKRD13	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ProteinID:CCB47630	ProteinID:CCB47630.1	UniProt:F6H5Z1	EMBL:FN595241
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	EntrezGene:LOC100242512	wikigene:LOC100242512
PFAM:PF11904	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248
SUPFAM:SSF48403	TIGR:TC58509	TIGR:TC59675	TIGR:TC62187	UniParc:UPI0002108CF0	ArrayExpress:VIT_14s0036g01030
EnsemblPlantsGene:VIT_14s0036g01030	EnsemblPlants:VIT_14s0036g01030.t01	RefSeq:XP_002266715	RefSeq:XP_002266715.2	SEG:seg	:

Description

No Description!

Coordinates

chr14:+:11575990..11584032

Molecular Weight (calculated)

73820.8 Da

IEP (calculated)

6.640

GRAVY (calculated)

-0.674

Length

660 amino acids

Sequence
(BLAST)

001: MEDFSKYAHS PAHLAVARRD HAALKRIISA LPRLAKAGEV NTEDDSVAAE LQADEVSAII DRRDVPGRET PLHLAVRLRD PVSAELLMAA GADWSLQNEN
101: GWSALQEAVC TREESIAMII ARHYQPLAWA KWCRRLPRIV ASAARIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFRIQRS
201: DQTFLFLGEG YSSEDGNVSL APGSLIVLAH KEKEITNALE GAGAQPTEAE VAHEVTLMSQ TNMYRPGIDV TQAELVPHLN WRRQERTEVV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVEDDERI ANGGDNDDYD DVLTAEERMQ LDSALRMGNS DGVCEDEDHG VHDSQEHGSG GSFENCESNG TVKEKKSWFG
401: WNKKGSKNGS DDPEDSKILK KFSKLAPESS NQRTVDNQKS SFELSREDMG DVKKGKEKSS KKKKKKGASG DSKHESEYKK GLRPVLWLTP DFPLQTDELL
501: PLLDILANKV KAVRRLRELL TTKLPHGTFP VKVAIPIVPT IRVLVTFTKF EELQPVEEFS TPLSSPAHFQ DAKSKESEGS TSWISWMRGS RGGQSSDGES
601: HRYKDDIDPF HIPSDYTWVD ANEKKRRLKA KKAKSKKHRK HVGAKGGGDG GHQMSEDLED

Best Arabidopsis Sequence Match ( AT3G04470.1 )
(BLAST)

001: MEDYSKYTHS PAHLAVVLRD HAALRRIVSD LPRLAKAGEV TTEAESMESE SRADSVSAVI DRRDVPGRET PLHLAVRLRD PVSAEILMSA GADWSLQNEN
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9M840]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.