CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	38.46	91.7
VIT_14s0036g01030.t01	Wine grape	nucleus	77.79	81.21
KRG92643	Soybean	cytosol	75.33	80.47
PGSC0003DMT400060183	Potato	nucleus	72.71	76.14
Solyc05g054970.2.1	Tomato	extracellular, nucleus	72.71	76.14
CDX86213	Canola	nucleus	65.75	72.36
KRH34141	Soybean	plastid	75.33	71.59
EES05988	Sorghum	nucleus	65.17	71.16
GSMUA_Achr11P...	Banana	nucleus	66.18	71.14
Os02t0810100-00	Rice	plasma membrane	65.02	70.77
Zm00001d051948_P001	Maize	cytosol	64.88	70.73
CDY48669	Canola	nucleus	64.01	70.56
TraesCS6B01G417700.1	Wheat	nucleus	64.3	70.32
GSMUA_Achr10P...	Banana	nucleus	62.55	70.2
TraesCS6D01G363800.1	Wheat	nucleus	64.01	70.0
TraesCS6A01G379500.1	Wheat	nucleus	64.01	70.0
Bra036125.1-P	Field mustard	nucleus	62.55	69.97
AT3G04470.1	Thale cress	nucleus	64.88	69.84
KRG97040	Soybean	nucleus	31.2	69.81
Zm00001d018443_P001	Maize	mitochondrion	63.72	69.57
Bra010013.1-P	Field mustard	nucleus	64.15	68.21
PGSC0003DMT400025371	Potato	cytosol	59.8	67.87
PGSC0003DMT400025373	Potato	nucleus	12.92	65.93
CDY00019	Canola	mitochondrion	62.84	61.68
Solyc06g036620.1.1	Tomato	cytosol, nucleus, plastid	55.88	61.4
CDY57011	Canola	nucleus, plastid	62.12	61.23
Solyc06g036630.1.1	Tomato	endoplasmic reticulum	13.35	60.53
HORVU6Hr1G089010.1	Barley	nucleus	62.26	56.37
KRG90233	Soybean	cytosol	50.22	53.31
KRH33461	Soybean	cytosol	50.07	53.16
KRH02059	Soybean	cytosol	40.78	50.0
KRH51100	Soybean	cytosol	40.35	48.94
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	38.61	47.76
KRH36464	Soybean	plastid	39.33	46.8
KRH11439	Soybean	nucleus	39.91	46.69
KRG90235	Soybean	nucleus	37.01	46.53

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100804861	MapMan:35.2	EMBL:ACUP02002123	InterPro:ANKRD13	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_03G250400	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	UniProt:I1JRS1
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	EnsemblPlants:KRH68787	ProteinID:KRH68787	ProteinID:KRH68787.1
PFAM:PF11904	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SUPFAM:SSF48403
UniParc:UPI000233A4D8	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:44616477..44621289

Molecular Weight (calculated)

77210.8 Da

IEP (calculated)

6.691

GRAVY (calculated)

-0.711

Length

689 amino acids

Sequence
(BLAST)

001: MEANGITHDS SLGAGRRDKR EVGDKTMEDL SKYVHSPAHL AVARRDHAAL RHIVSALPRL AKAGEVTTEV ESIASELQAD EVSTVIDCRD VPGRETPLHL
101: AVRLRDPVSA EILMAAGADW SLQNEHGWSA LQEAVCTREE AIAMIIARHY QPLAWAKWCR RLPRIVASAS RIRDFYMEIS FHFESSVIPF IGRIAPSDTY
201: RIWKRGSNLR ADMTLAGFDG LRIQRSDQTF LFLGEGYVAE EGNFTLPPGS LIALSHKEKE ITNALEGAGT QPTESEVAHE VSLMSQTNMY RPGIDVTQAE
301: LVPHLNWRRQ EKTEMVGNWK AKVYDMLHVM VSVKSRRVPG AMTDEELFAV EDGESMMNGE NNDEYDDVLT AEERMQLDSA LHMGNSDGTY EDEEHGAFDG
401: QENGSAASRE NSEANGVVKE KKSWFGWNKK SLKSSSDDPE DSKAVKKNSR FGSEGSNQRS ADQPKLASDF LREDSVDSRK GKDKNIKKKK KKGANNNESK
501: NESEYKKGLR PVLWLTPDFP LKTDELLPLL DILANKVKAI RRLRELLTTK LPHGTFPVKV AIPIVPTIRV LVTFTKFEEL QPVEEFSTPL SSPAHFYDAK
601: SKESEGSGSW ISWMKGSRGG QSSDSDSHRY KDEVDPFSIP ADYKWVDANE KKRRMKAKKA KSKKHKKQTA AKGGDGVQHQ RTEDVEEEQ

Best Arabidopsis Sequence Match ( AT3G04470.1 )
(BLAST)

001: MEDYSKYTHS PAHLAVVLRD HAALRRIVSD LPRLAKAGEV TTEAESMESE SRADSVSAVI DRRDVPGRET PLHLAVRLRD PVSAEILMSA GADWSLQNEN
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9M840]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.