Factsheet for GSMUA_Achr10P07890_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	84.04	80.5
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	35.67	75.78
EES05988	Sorghum	nucleus	71.5	69.57
Os02t0810100-00	Rice	plasma membrane	71.34	69.19
Zm00001d051948_P001	Maize	cytosol	71.01	68.99
Zm00001d018443_P001	Maize	mitochondrion	70.85	68.94
TraesCS6A01G379500.1	Wheat	nucleus	69.38	67.62
TraesCS6D01G363800.1	Wheat	nucleus	69.06	67.3
TraesCS6B01G417700.1	Wheat	nucleus	69.06	67.3
VIT_14s0036g01030.t01	Wine grape	nucleus	71.82	66.82
CDY48669	Canola	nucleus	67.59	66.4
CDX86213	Canola	nucleus	67.26	65.97
Bra036125.1-P	Field mustard	nucleus	65.47	65.26
Solyc05g054970.2.1	Tomato	extracellular, nucleus	69.06	64.44
PGSC0003DMT400060183	Potato	nucleus	68.89	64.29
AT3G04470.1	Thale cress	nucleus	66.29	63.59
KRG92643	Soybean	cytosol	66.78	63.57
Bra010013.1-P	Field mustard	nucleus	66.78	63.27
GSMUA_Achr5P13140_001	Banana	mitochondrion	53.91	62.57
KRH68787	Soybean	nucleus	70.2	62.55
PGSC0003DMT400025371	Potato	cytosol	58.96	59.64
CDY57011	Canola	nucleus, plastid	65.8	57.8
GSMUA_Achr1P01140_001	Banana	cytosol	51.3	57.59
KRH34141	Soybean	plastid	67.92	57.52
CDY00019	Canola	mitochondrion	65.64	57.41
GSMUA_Achr4P26640_001	Banana	cytosol	55.05	56.24
HORVU6Hr1G089010.1	Barley	nucleus	66.94	54.01
Solyc06g036620.1.1	Tomato	cytosol, nucleus, plastid	54.07	52.95
Solyc06g036630.1.1	Tomato	endoplasmic reticulum	13.03	52.63
PGSC0003DMT400025373	Potato	nucleus	11.24	51.11
KRG97040	Soybean	nucleus	23.29	46.43
GSMUA_Achr2P13940_001	Banana	cytosol	41.21	44.15

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr10G07890_001	EnsemblPlants:GSMUA_Achr10P07890_001	EnsemblPlants:GSMUA_Achr10T07890_001
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0RGB5	PFAM:PF11904	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SUPFAM:SSF48403	UniParc:UPI0002960167	SEG:seg

Description

ankyrin repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G07890_001]

Coordinates

chr10:+:17948287..17953729

Molecular Weight (calculated)

68973.3 Da

IEP (calculated)

8.772

GRAVY (calculated)

-0.719

Length

614 amino acids

Sequence
(BLAST)

001: MEDLSKYAHS PAHLAVSRRD HAGLRRIVAA LPRLPKTGDV TTEQESLAGE LTADAVSSVI DRRDVPHRET PLHLAVRLRD PTSAEILMSA GADWSLQNEH
101: GWSALQEAVC NREDAIAMII ARHYQPLAWA KWCRRLPRIV SSITRIQDFY MEITFHFESS VIPFISRIAP SDTYRIWKRG PNLRADMTLA GFDGFRIQRS
201: DQTFLFLGQG AQGDNGHPPL PPGSLIVLSH KEKEITNALE GAGAKPTEAE VAHEVALMSQ TNMYRPGIDV TQAELVPHLN WRRQERAEMV GNWKTKVYDL
301: LNVMVSVKSR RVPGAMTDEE LFTIDNDERV ANGGDVDDEY EGNGAAFEGV ENSESNGVSK ERKSWFGWSG KRTSKNSGGE DTDDTKNKHL KACPENGHHK
401: SEIAKETGDT KKGKEKSTKK RSGNESNKHE SEFKKGVRPV LWLTPDFPLK TDELLPLLDV LANKVKAVRR LRELLTTKLP QGTFPVKLAI PIVPTIRVLI
501: TFTKFEELQQ SDEFSTPLSS PTYFQESKAK ETEASGSWYS WMRGSRGGQS SDSSEGRSCK DEIDPFRIPS DYTWIDSNEK KRRMKAKKGK SKRGTNRKQS
601: SRSSEDKQLL DGFE

Best Arabidopsis Sequence Match ( AT3G04470.1 )
(BLAST)

001: MEDYSKYTHS PAHLAVVLRD HAALRRIVSD LPRLAKAGEV TTEAESMESE SRADSVSAVI DRRDVPGRET PLHLAVRLRD PVSAEILMSA GADWSLQNEN
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9M840]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.