Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97041 | Soybean | cytoskeleton, cytosol, nucleus | 35.0 | 77.51 |
| CDY48669 | Canola | nucleus | 75.47 | 77.28 |
| CDX86213 | Canola | nucleus | 75.0 | 76.68 |
| Bra036125.1-P | Field mustard | nucleus | 71.41 | 74.19 |
| Bra010013.1-P | Field mustard | nucleus | 74.69 | 73.77 |
| VIT_14s0036g01030.t01 | Wine grape | nucleus | 70.94 | 68.79 |
| Os02t0810100-00 | Rice | plasma membrane | 67.03 | 67.77 |
| Solyc05g054970.2.1 | Tomato | extracellular, nucleus | 69.53 | 67.63 |
| KRG92643 | Soybean | cytosol | 68.12 | 67.6 |
| EES05988 | Sorghum | nucleus | 66.56 | 67.51 |
| PGSC0003DMT400060183 | Potato | nucleus | 69.22 | 67.33 |
| TraesCS6D01G363800.1 | Wheat | nucleus | 66.25 | 67.3 |
| TraesCS6B01G417700.1 | Wheat | nucleus | 66.25 | 67.3 |
| TraesCS6A01G379500.1 | Wheat | nucleus | 66.25 | 67.3 |
| Zm00001d018443_P001 | Maize | mitochondrion | 66.09 | 67.04 |
| Zm00001d051948_P001 | Maize | cytosol | 65.78 | 66.61 |
| GSMUA_Achr11P... | Banana | nucleus | 66.41 | 66.3 |
| GSMUA_Achr10P... | Banana | nucleus | 63.59 | 66.29 |
| CDY00019 | Canola | mitochondrion | 71.41 | 65.1 |
| CDY57011 | Canola | nucleus, plastid | 70.94 | 64.95 |
| KRH68787 | Soybean | nucleus | 69.84 | 64.88 |
| PGSC0003DMT400025371 | Potato | cytosol | 61.25 | 64.58 |
| KRH34141 | Soybean | plastid | 69.53 | 61.38 |
| Solyc06g036620.1.1 | Tomato | cytosol, nucleus, plastid | 56.56 | 57.74 |
| HORVU6Hr1G089010.1 | Barley | nucleus | 64.38 | 54.14 |
| AT1G04780.1 | Thale cress | cytosol | 54.22 | 52.26 |
| AT3G24210.1 | Thale cress | nucleus | 49.53 | 52.22 |
| Solyc06g036630.1.1 | Tomato | endoplasmic reticulum | 11.56 | 48.68 |
| KRG97040 | Soybean | nucleus | 21.88 | 45.45 |
| PGSC0003DMT400025373 | Potato | nucleus | 9.53 | 45.19 |
| AT1G62050.1 | Thale cress | cytosol, nucleus, plastid | 41.25 | 42.31 |
| AT1G11740.1 | Thale cress | cytosol | 39.84 | 39.6 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.2 | EntrezGene:819603 | UniProt:A0A178VBW0 | ProteinID:AAF63778.1 | ProteinID:AEE74086.1 |
| InterPro:ANKRD13 | ArrayExpress:AT3G04470 | EnsemblPlantsGene:AT3G04470 | RefSeq:AT3G04470 | TAIR:AT3G04470 | RefSeq:AT3G04470-TAIR-G |
| EnsemblPlants:AT3G04470.1 | TAIR:AT3G04470.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | Unigene:At.28003 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 | InterPro:IPR002110 | InterPro:IPR020683 |
| InterPro:IPR036770 | RefSeq:NP_566227.3 | ProteinID:OAP03161.1 | PFAM:PF11904 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR12447 | PANTHER:PTHR12447:SF17 |
| UniProt:Q9M840 | SUPFAM:SSF48403 | UniParc:UPI00000A25ED | SEG:seg | : | : |
Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9M840]
Coordinates
chr3:-:1189595..1192659
Molecular Weight (calculated)
71504.4 Da
IEP (calculated)
7.237
GRAVY (calculated)
-0.650
Length
640 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDYSKYTHS PAHLAVVLRD HAALRRIVSD LPRLAKAGEV TTEAESMESE SRADSVSAVI DRRDVPGRET PLHLAVRLRD PVSAEILMSA GADWSLQNEN
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.