Factsheet for HORVU6Hr1G089010.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G363800.1	Wheat	nucleus	78.45	94.76
TraesCS6A01G379500.1	Wheat	nucleus	78.32	94.6
TraesCS6B01G417700.1	Wheat	nucleus	78.19	94.44
Os02t0810100-00	Rice	plasma membrane	71.09	85.47
Zm00001d051948_P001	Maize	cytosol	70.83	85.28
EES05988	Sorghum	nucleus	70.56	85.1
Zm00001d018443_P001	Maize	mitochondrion	70.17	84.63
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	26.28	69.2
CDX86213	Canola	nucleus	55.45	67.41
CDY48669	Canola	nucleus	55.06	67.04
GSMUA_Achr10P...	Banana	nucleus	54.01	66.94
GSMUA_Achr11P...	Banana	nucleus	55.85	66.3
Bra036125.1-P	Field mustard	nucleus	52.43	64.77
VIT_14s0036g01030.t01	Wine grape	nucleus	56.11	64.7
AT3G04470.1	Thale cress	nucleus	54.14	64.38
KRG92643	Soybean	cytosol	54.4	64.19
Bra010013.1-P	Field mustard	nucleus	53.75	63.12
KRH68787	Soybean	nucleus	56.37	62.26
PGSC0003DMT400060183	Potato	nucleus	53.09	61.4
Solyc05g054970.2.1	Tomato	extracellular, nucleus	53.09	61.4
KRH34141	Soybean	plastid	55.72	58.48
CDY57011	Canola	nucleus, plastid	52.83	57.51
CDY00019	Canola	mitochondrion	52.69	57.12
PGSC0003DMT400025371	Potato	cytosol	45.47	57.0
PGSC0003DMT400025373	Potato	nucleus	9.59	54.07
HORVU2Hr1G052030.1	Barley	cytosol	7.1	53.47
Solyc06g036620.1.1	Tomato	cytosol, nucleus, plastid	43.1	52.31
Solyc06g036630.1.1	Tomato	endoplasmic reticulum	10.25	51.32
KRG97040	Soybean	nucleus	20.11	49.68
HORVU2Hr1G046900.2	Barley	plastid	30.22	38.4

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	UniProt:A0A287V3Y0	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0016020	EnsemblPlantsGene:HORVU6Hr1G089010	EnsemblPlants:HORVU6Hr1G089010.1	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	PFAM:PF11904	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17
SUPFAM:SSF48403	UniParc:UPI000B47B4E6	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:568036829..568040711

Molecular Weight (calculated)

73356.4 Da

IEP (calculated)

8.560

GRAVY (calculated)

-0.595

Length

761 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXAGPA DSAPPRPPRA PDLSARPPHA
101: SSLAPDPPRL APRAPTGSEA GPPPQLASQP AMEDAARYAH SPAHLAVYRR DHAALRTXXX XXXXXXXXXX XXXXXXSIAG ERVADAVSAV IDRRDVPRRE
201: TPLHLAVRLR DPVAADVLMS AGADWSLQNA DGWSALQEAV CTREDAIATI IARHYQPLAW AKWCRRLPRV LASVSRIRDF YMEISFHFES SVIPFIGRIA
301: PSDTYRIWKR GAALRADMTL AGFDGFRIQR SDQTFLFLGD GARPEDAGGK ELLPGSLIVL SHKDKEITDA LEGAGVQPTE SEVAHEVALM SKTNMYRPGI
401: DVTQADLVPH VNWRRQERTE AVGQWKAKVY DMLNVLVTVK SRRVPGAMTD EELFAMDGEE KNGRGAELET ELDEVLTAEE RKQLDSALRG NQEEESEDRA
501: EEGDKGGDQL DANGAGKDKK GWFWNGKKGA KNDEKPPKSV SKDESGDPGK GKEKGNGKKK KGGVSSGDSN KLESEYKKGL RPVLWLTPDF PLKTDELIPL
601: LDVLANKVKA VRRLRELLTT KLPTGTFPVK IAIPIVPTIR VIVTFTKFEE LQPLDEFATP PTSPTQFQDA RSKDSEGSAS WYSWVRGGRG AQSSDSGDSK
701: NWKDEVDPFH IPSEYTWVDA AEKKRRMKAK KAKSRRSTTR KQSSKSTSSE GAQHPMMDGF E

Best Arabidopsis Sequence Match ( AT3G04470.1 )
(BLAST)

001: MEDYSKYTHS PAHLAVVLRD HAALRRIVSD LPRLAKAGEV TTEAESMESE SRADSVSAVI DRRDVPGRET PLHLAVRLRD PVSAEILMSA GADWSLQNEN
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9M840]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.