CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036125.1-P	Field mustard	nucleus	85.55	97.08
CDY00019	Canola	mitochondrion	85.55	85.19
CDX86213	Canola	nucleus	72.39	80.83
CDY48669	Canola	nucleus	71.24	79.68
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	30.47	73.7
AT3G04470.1	Thale cress	nucleus	64.95	70.94
VIT_14s0036g01030.t01	Wine grape	nucleus	62.37	66.06
EES05988	Sorghum	nucleus	59.51	65.93
GSMUA_Achr10P...	Banana	nucleus	57.8	65.8
Os02t0810100-00	Rice	plasma membrane	59.23	65.4
Zm00001d051948_P001	Maize	cytosol	59.08	65.35
Zm00001d018443_P001	Maize	mitochondrion	58.66	64.98
TraesCS6D01G363800.1	Wheat	nucleus	58.51	64.92
TraesCS6B01G417700.1	Wheat	nucleus	58.37	64.76
TraesCS6A01G379500.1	Wheat	nucleus	58.37	64.76
KRG92643	Soybean	cytosol	59.66	64.65
GSMUA_Achr11P...	Banana	nucleus	59.23	64.59
Solyc05g054970.2.1	Tomato	extracellular, nucleus	60.37	64.13
PGSC0003DMT400060183	Potato	nucleus	60.37	64.13
KRH68787	Soybean	nucleus	61.23	62.12
PGSC0003DMT400025371	Potato	cytosol	52.5	60.46
KRH34141	Soybean	plastid	61.09	58.9
Solyc06g036620.1.1	Tomato	cytosol, nucleus, plastid	48.07	53.59
CDX89790	Canola	cytosol	48.07	53.0
HORVU6Hr1G089010.1	Barley	nucleus	57.51	52.83
CDY18256	Canola	cytosol	48.35	52.48
CDX85149	Canola	nucleus, plastid	44.21	52.28
Solyc06g036630.1.1	Tomato	endoplasmic reticulum	10.73	49.34
CDY45348	Canola	cytosol	39.91	48.27
PGSC0003DMT400025373	Potato	nucleus	9.3	48.15
KRG97040	Soybean	nucleus	21.03	47.73
CDY07249	Canola	cytosol, plastid	37.34	45.87
CDY24874	Canola	cytosol	38.34	45.42
CDY31210	Canola	nucleus	32.62	43.93
CDY21008	Canola	cytosol	31.62	43.0
CDX97982	Canola	cytosol, nucleus, peroxisome	37.05	40.53
CDX77466	Canola	plastid	43.49	28.33
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	36.05	26.03

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	UniProt:A0A078IY73	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY57011	ProteinID:CDY57011	ProteinID:CDY57011.1	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00020423001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
PFAM:PF11904	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248
SUPFAM:SSF48403	UniParc:UPI0004EF3456	SEG:seg	:	:	:

Description

BnaA09g03520DBnaA09g03520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IY73]

Coordinates

chrLK033541:-:8375..11088

Molecular Weight (calculated)

78279.9 Da

IEP (calculated)

9.181

GRAVY (calculated)

-0.566

Length

699 amino acids

Sequence
(BLAST)

001: MEHRKLKQPP CKCKAKIRWQ SPYTVARSNC RCTIIINRSH SLPLDSSGSS FGFLRPFSLL RYQTLEQLAY VGHYFLRFVS AKSIGCLMED YSKYTHSPAH
101: LAVVLHDHTA LRRIITNLPT LSKAGEVTNE AESLQAESNA DSITAVIDRR DVPNRETPLH LAVRLRDPVC AEILMSAGAD WSLQNENGWS ALQEAVCTRE
201: EAIAMIIARH YQPLAWAKWC RRLPRITASA SRIRDFYMEI TFHFESSVIP FVGRIAPSDT YRIWKRGCNL RADMTLAGFD GFRIQRSDQT FLFLGDGYSS
301: DDGKVSLPPG ALIVLSHKEK EVTNALEGAG AQPTEAEVAN EVKQMSQTNM YRPGIDVTQA ELVPQANWRR QERTESVGSW KAKVYDMMHV MVSVKSRSVP
401: GAVSDEEMFA VDGVAANGGE NDGFEDVLTS EERKQLDSAL LMEVDEENDH HQENGASLKE KKGWFGWNKK GSKPGYDGGS EDNTATKVKK GSKLASEKGK
501: SQRSSTLSDN TKKKKSESEY KKGLRPVLWL TPDFPLKTEE LLPLLDILAN KVKAVRRLRE LLTTKLPTGT FPVKIAIPII PTVRVLVTFT KFEELQPSEE
601: FSTPPSSPVF HDAKSSDNSS WVSWMKGARG GGQASDCESN RYRDDEVDPF LIPSDYTWVD SAEKKRRMKA KKARIRKNRK HGAPKPGSSS SRSNQEADA

Best Arabidopsis Sequence Match ( AT3G04470.1 )
(BLAST)

001: MEDYSKYTHS PAHLAVVLRD HAALRRIVSD LPRLAKAGEV TTEAESMESE SRADSVSAVI DRRDVPGRET PLHLAVRLRD PVSAEILMSA GADWSLQNEN
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9M840]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.