Factsheet for Zm00001d018443_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05988	Sorghum	nucleus	94.93	94.93
Zm00001d051948_P001	Maize	cytosol	93.66	93.51
Os02t0810100-00	Rice	plasma membrane	89.38	89.1
TraesCS6A01G379500.1	Wheat	nucleus	87.32	87.46
TraesCS6B01G417700.1	Wheat	nucleus	87.16	87.3
TraesCS6D01G363800.1	Wheat	nucleus	87.16	87.3
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	33.44	73.01
GSMUA_Achr11P...	Banana	nucleus	72.27	71.14
GSMUA_Achr10P...	Banana	nucleus	68.94	70.85
HORVU6Hr1G089010.1	Barley	nucleus	84.63	70.17
CDX86213	Canola	nucleus	67.67	68.21
CDY48669	Canola	nucleus	67.19	67.84
VIT_14s0036g01030.t01	Wine grape	nucleus	70.68	67.58
KRG92643	Soybean	cytosol	68.3	66.82
Bra036125.1-P	Field mustard	nucleus	65.13	66.72
AT3G04470.1	Thale cress	nucleus	67.04	66.09
Bra010013.1-P	Field mustard	nucleus	66.24	64.51
PGSC0003DMT400060183	Potato	nucleus	67.19	64.44
Solyc05g054970.2.1	Tomato	extracellular, nucleus	67.19	64.44
KRH68787	Soybean	nucleus	69.57	63.72
KRH34141	Soybean	plastid	67.99	59.17
PGSC0003DMT400025371	Potato	cytosol	56.89	59.14
CDY57011	Canola	nucleus, plastid	64.98	58.66
CDY00019	Canola	mitochondrion	64.98	58.4
Zm00001d019522_P001	Maize	cytosol	57.21	55.2
Zm00001d005442_P001	Maize	cytosol	56.42	54.19
Solyc06g036620.1.1	Tomato	cytosol, nucleus, plastid	53.41	53.75
PGSC0003DMT400025373	Potato	nucleus	11.41	53.33
Solyc06g036630.1.1	Tomato	endoplasmic reticulum	12.84	53.29
KRG97040	Soybean	nucleus	24.25	49.68
Zm00001d021613_P001	Maize	plastid	37.24	38.21
Zm00001d000437_P001	Maize	endoplasmic reticulum, plasma membrane	13.47	24.5
Zm00001d008419_P001	Maize	endoplasmic reticulum, plasma membrane	12.52	22.25
Zm00001d051347_P001	Maize	endoplasmic reticulum, plasma membrane	10.78	22.22
Zm00001d037614_P001	Maize	cytosol	11.09	21.6
Zm00001d019332_P001	Maize	cytosol	4.44	17.83

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:103627882	MapMan:35.2	UniProt:A0A1D6HP05	InterPro:ANKRD13	ProteinID:AQK76010.1
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF11904	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SUPFAM:SSF48403	UniParc:UPI000221D44F	EnsemblPlantsGene:Zm00001d018443	EnsemblPlants:Zm00001d018443_P001
EnsemblPlants:Zm00001d018443_T001	SEG:seg	:	:	:	:

Description

Ankyrin repeat family protein

Coordinates

chr5:+:220931187..220935179

Molecular Weight (calculated)

70150.1 Da

IEP (calculated)

7.501

GRAVY (calculated)

-0.630

Length

631 amino acids

Sequence
(BLAST)

001: MDDVSRYAHS PAHLAVLRRD HAALRRLVAA LPRLPRAGEV ATEEESIAGE ALADAVSAVV DRRDVPRRET PLHLAVRLRD PVAADVLMSA GADWSLQNAD
101: GWSALQEAVC TREEAIATII ARHYQPLAWA KWCRRLPRIL ASISRIRDFY MEITFHFESS VIPFISRIAP SDTYRIWKRG AALRADMTLA GFDGFRIQRS
201: DQTFLFLGDG ARPEDAGGKE LHPGSLIVLA HKDKEITDAL EGAGVQPTES EVAHEVALMS KTNMYRPGID VTQAELVPHL NWRRQERAEA VGQWKAKVYD
301: MLNVLVTVKS RRVPGAMTDE ELFAMDGEEK NGRGAELDAE LDEVLTAEER KQLDSALRMG NNEEESEQRC DEGDTGAGHM DEHAAAKDKK GWFGWGGKKG
401: AKGDDKPSKM GSKDETSDPG KQKEKGSGKK KKGGSPAESL KHESEYKKGL RPVLWLTPDF PLKTDELIPL LDVLANKVKA VRRLRELLTT KLPTGTFPVK
501: IAIPIVPTIR VIVTFTKFEE LQPLDEFATP PSSPTQFQDA KTKESEGSGS WYSWVKGGRG TQSSDSGDSR SWKDEVDPFH IPSDYTWVDA TEKKRRMKAK
601: KAKSRRGPAR KQSSKNTAEG AHRPMMDGFE E

Best Arabidopsis Sequence Match ( AT3G04470.1 )
(BLAST)

001: MEDYSKYTHS PAHLAVVLRD HAALRRIVSD LPRLAKAGEV TTEAESMESE SRADSVSAVI DRRDVPGRET PLHLAVRLRD PVSAEILMSA GADWSLQNEN
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9M840]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.