Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037614_P001 | Maize | cytosol | 23.2 | 21.91 |
| Zm00001d018443_P001 | Maize | mitochondrion | 22.22 | 10.78 |
| Zm00001d051948_P001 | Maize | cytosol | 22.22 | 10.76 |
| Zm00001d008419_P001 | Maize | endoplasmic reticulum, plasma membrane | 11.11 | 9.58 |
| Zm00001d000437_P001 | Maize | endoplasmic reticulum, plasma membrane | 10.78 | 9.51 |
| Zm00001d005442_P001 | Maize | cytosol | 18.95 | 8.83 |
| Zm00001d019522_P001 | Maize | cytosol | 18.63 | 8.72 |
| Zm00001d021613_P001 | Maize | plastid | 16.99 | 8.46 |
| Zm00001d019332_P001 | Maize | cytosol | 2.29 | 4.46 |
Protein Annotations
| EnsemblPlants:Zm00001d051347_P001 | EnsemblPlants:Zm00001d051347_T001 | EnsemblPlantsGene:Zm00001d051347 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ProteinID:AQK54083.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0008428AA2 | UniProt:A0A1D6Q6E5 | MapMan:35.2 |
Description
Ankyrin repeat family protein
Coordinates
chr4:-:155301447..155306131
Molecular Weight (calculated)
33057.3 Da
IEP (calculated)
7.255
GRAVY (calculated)
-0.521
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEVESSSA VALLLVLVAP VVVPSMALLV RGQWRRAAPR REEGEGIIID IMTLESGLRE DTHPMGAELR ESKLMNKYNE LKEAGKLDAF MERRRSKNAS
101: KDHWRHSRCG SSATPKSLPR GTTRHDAPAP NTTLASPSIQ PTQRGGAAFA LGDPTEAEEQ CGRVAAAAVM CIGEARRGRY LRPAPRDDDD GWSQVEGGGD
201: GEDVEAVGVA HGGLPPERRQ IHVVAGHPGL PCVRRALAPR AAHHQVPTGD FPSKVANHHA GAEPPRHMAH PPLHLKAVTA LNAHPGEALI TVETEEMYNA
301: RSRNLL
101: KDHWRHSRCG SSATPKSLPR GTTRHDAPAP NTTLASPSIQ PTQRGGAAFA LGDPTEAEEQ CGRVAAAAVM CIGEARRGRY LRPAPRDDDD GWSQVEGGGD
201: GEDVEAVGVA HGGLPPERRQ IHVVAGHPGL PCVRRALAPR AAHHQVPTGD FPSKVANHHA GAEPPRHMAH PPLHLKAVTA LNAHPGEALI TVETEEMYNA
301: RSRNLL
001: MKGAGKFEGS SSKIVFEDSE EDEDLSCSSV SSSDEEEETE KELTFEEIHK LRADGSKAVP WKPNQVKKTG RARANKNRPM EVSSKKPVSR YREVVHVPKK
101: EVRDPRFNQL GGTLDVEGFR KRYNFFFEDK LPVEREELKK KLKKTKNPEE IDELKNQLTY VEKMLKYEPS TQNKGAAILT EHKKKEREAA KEGKRPYYLK
201: KSEIRKQTLI EKYNSLKESG KLTSYLDKRR KKNATKDHRF MPYRRAEE
101: EVRDPRFNQL GGTLDVEGFR KRYNFFFEDK LPVEREELKK KLKKTKNPEE IDELKNQLTY VEKMLKYEPS TQNKGAAILT EHKKKEREAA KEGKRPYYLK
201: KSEIRKQTLI EKYNSLKESG KLTSYLDKRR KKNATKDHRF MPYRRAEE
Arabidopsis Description
At1g12650/T12C24_1 [Source:UniProtKB/TrEMBL;Acc:Q8W1E4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.