CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, nucleus
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68787	Soybean	nucleus	91.7	38.46
KRG92643	Soybean	cytosol	80.62	36.12
PGSC0003DMT400025371	Potato	cytosol	75.78	36.08
GSMUA_Achr10P...	Banana	nucleus	75.78	35.67
CDX86213	Canola	nucleus	76.47	35.3
CDY48669	Canola	nucleus	76.12	35.2
VIT_14s0036g01030.t01	Wine grape	nucleus	80.28	35.15
AT3G04470.1	Thale cress	nucleus	77.51	35.0
Bra036125.1-P	Field mustard	nucleus	73.01	34.25
GSMUA_Achr11P...	Banana	nucleus	75.78	34.17
Bra010013.1-P	Field mustard	nucleus	76.47	34.1
EES05988	Sorghum	nucleus	74.39	34.07
Solyc05g054970.2.1	Tomato	extracellular, nucleus	77.16	33.89
PGSC0003DMT400060183	Potato	nucleus	77.16	33.89
TraesCS6D01G363800.1	Wheat	nucleus	73.7	33.81
TraesCS6B01G417700.1	Wheat	nucleus	73.7	33.81
Zm00001d051948_P001	Maize	cytosol	73.7	33.7
Solyc06g036620.1.1	Tomato	cytosol, nucleus, plastid	73.01	33.65
TraesCS6A01G379500.1	Wheat	nucleus	73.36	33.65
Os02t0810100-00	Rice	plasma membrane	73.7	33.65
Zm00001d018443_P001	Maize	mitochondrion	73.01	33.44
KRH34141	Soybean	plastid	81.31	32.41
CDY57011	Canola	nucleus, plastid	73.7	30.47
CDY00019	Canola	mitochondrion	73.7	30.34
HORVU6Hr1G089010.1	Barley	nucleus	69.2	26.28
KRH02059	Soybean	cytosol	50.52	25.98
KRG90233	Soybean	cytosol	58.13	25.89
KRH33461	Soybean	cytosol	57.44	25.58
KRH51100	Soybean	cytosol	50.17	25.53
KRH11439	Soybean	nucleus	49.83	24.45
KRH36464	Soybean	plastid	48.44	24.18
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	44.64	23.16
KRG90235	Soybean	nucleus	43.25	22.81
KRG97040	Soybean	nucleus	5.88	5.52
Solyc06g036630.1.1	Tomato	endoplasmic reticulum	0.69	1.32
PGSC0003DMT400025373	Potato	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	UniProt:A0A0R0F1G4	EMBL:ACUP02012172	InterPro:ANKRD13	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_19G2480001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	EnsemblPlants:KRG97041	ProteinID:KRG97041	ProteinID:KRG97041.1	PFAM:PF11904	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SUPFAM:SSF48403	UniParc:UPI0006ED69B1	:

Description

hypothetical protein

Coordinates

chr19:-:49396645..49398410

Molecular Weight (calculated)

32067.0 Da

IEP (calculated)

6.355

GRAVY (calculated)

-0.291

Length

289 amino acids

Sequence
(BLAST)

001: MEANGIAHDS SSLGAGRRDK REVGDKMVED LSKYAHSPAH LAVARRDHAS LRRIVSALPR LAKAGEVHTE AESIAAELQA DEVSSFIDRR DVPGRETPLH
101: LAVRLRDPVS AEILMAAGAD WSLQNEHGWS ALQEAVCTRE EAIAMIIARH YQPLAWAKWC RRLPRIVASA SRIRDFYMEI SFHFESSVIP FIGRIAPSDT
201: YRIWKRGSNL RADMTLAGFD GLRIQRSDQT FLFLGEGYVA EEGNLTLPPG SLIALSHKEK EITYALEGAG TQPTESEVAY EVSLMSQTN

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.