CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36464	Soybean	plastid	85.23	86.7
KRH51100	Soybean	cytosol	73.17	75.88
KRH02059	Soybean	cytosol	71.65	75.09
Solyc02g080610.2.1	Tomato	cytosol	65.53	65.98
PGSC0003DMT400042418	Potato	cytosol, plastid	44.31	56.62
GSMUA_Achr2P13940_001	Banana	cytosol	48.56	49.91
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	24.45	49.83
HORVU2Hr1G046900.2	Barley	plastid	45.67	44.91
Zm00001d021613_P001	Maize	plastid	46.86	44.88
TraesCS2A01G224100.1	Wheat	plastid	46.01	44.87
TraesCS2B01G274300.1	Wheat	plastid	45.84	44.63
EER99440	Sorghum	plastid	46.52	44.55
TraesCS2D01G230400.1	Wheat	plastid	45.33	44.21
Os07t0512100-01	Rice	plastid	45.84	44.05
KRG92643	Soybean	cytosol	45.84	41.86
KRG90235	Soybean	nucleus	38.2	41.06
KRH33461	Soybean	cytosol	44.65	40.52
KRG90233	Soybean	cytosol	44.48	40.37
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	37.86	40.04
KRH68787	Soybean	nucleus	46.69	39.91
KRH34141	Soybean	plastid	45.67	37.1
KRG97040	Soybean	nucleus	18.85	36.04

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100798925	MapMan:35.2	EMBL:ACUP02009209	InterPro:ANKRD13	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_15G108300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	UniProt:I1MFH7	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	EnsemblPlants:KRH11439	ProteinID:KRH11439	ProteinID:KRH11439.1	PFAM:PF11904
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF7	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI000233B44C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:8518412..8520954

Molecular Weight (calculated)

65506.8 Da

IEP (calculated)

10.263

GRAVY (calculated)

-0.441

Length

589 amino acids

Sequence
(BLAST)

001: MAKSSKDPTT SYPAIKSEQY LHSPVHYAVA IRDHTKLSRI ISSLPRVPDP ARVITESDSL TQERVAEKIS AVLDRRDVPF RETPLHLAVR LNDVSAARAI
101: ASAGADISLH NAAGWNPLQE ALCRRASEIA QVLVRLHHRA AWAKWRRRLP RLVAALRRMR DFYMEISFHF ESSVIPFVGK IAPSDTYKIW KSDGNLRADT
201: TLAGFDGLKI HRADQSFLFL GDGDSVAGVP AGSLLVLNRD DKKIFDAFEN AGTPMSDSDA AGFCSQSSVY RPGMDVTKAE LVGRTNWRRQ EKMENVGEWK
301: ARVFEVHNVV FSFRSRKVAA GESDVAGSEQ VLPLELDEDE DGFLVAENPS FGMPLSSNNN ADKRRHSSFV REEREWVPMG RKSVDLPSVS VAPPRRSSAA
401: AVAPPPAAPP TKEKEYLRSL RPAVWLTEQF PLKTEELLPL LDILANKVKA VRRLRELLTT KFPPGSFPVK VAIPVVPTVR VVVTFTKFVE LQPVEKFYTP
501: LSSPTHLLNA EDDDDPQKLR RQGSSSSGRS TWLRRSTSSS SSSQHQQRCS SSGALDSDPF AIPVGYTWTN SGNDSSRKMK KSRSVRKSK

Best Arabidopsis Sequence Match ( AT1G62050.1 )
(BLAST)

001: MARPSSASAT TAIRPEDYSH SPVHYAVVLG DHGALTRLLS SLPKLGDPEQ IRTESDSLSQ ERVADQISAV LDRRDVPSRE TPLHLAVRLD DLFAARAISS
101: AGGDISLQNA SGWNPLQEAF CRRNSEVMKV LLRHHHRLAW CKWRRRLPRL IAVLRRMRDF YMEISFHFES SVIPFVGKIA PSDTYKIWKR DGNLRADTTL
201: AGFDGLKIQR ADQSFLFLGD GDESLDISPG SLLVLNRDDR KILDAFESAG APISDSDIAG FCSQSSLYRP GMDVTKAELV GRTNWRRQEK MENVGEWKAR
301: VYEIQKVTFS FRSRKIVTGD GSEQVLPLEL DEDDEGFLVA ENPSFLAPPP RSQRRHSSFV KEDRDWISVG RKSVDVYPSA APPPPRQSQS PRRSVSQFQP
401: PRRSMAQVQP PRRSVAQAQP PRRSVALPST VSPVNPPPSP QIKEKEFVKS LHPSVWLTEQ FPLKTEELLP LLDILANKVK AVARMRDLLT TKFPPGTFPV
501: KLSIPVVPTV KVVITFTKFV ELPPAETFYT PLSSPRFLYS ATAGEEDHSD GEKPDARNSI SRPSTWLRLA TGKGSHRRVE EEEQQTPDPF AIPIGYKWTS
601: MSSSNSKSGN SSKMKKSKST KRTK

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q94CF4]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.