CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02059	Soybean	cytosol	89.26	90.21
KRH36464	Soybean	plastid	75.0	73.58
KRH11439	Soybean	nucleus	75.88	73.17
VIT_10s0116g01680.t01	Wine grape	nucleus	74.65	72.35
Bra034461.1-P	Field mustard	cytosol	70.42	67.8
CDY24874	Canola	cytosol	70.25	67.63
CDY07249	Canola	cytosol, plastid	67.08	66.96
Solyc02g080610.2.1	Tomato	cytosol	67.78	65.81
AT1G62050.1	Thale cress	cytosol, nucleus, plastid	69.89	63.62
PGSC0003DMT400042418	Potato	cytosol, plastid	46.83	57.7
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	25.53	50.17
GSMUA_Achr2P13940_001	Banana	cytosol	49.82	49.39
HORVU2Hr1G046900.2	Barley	plastid	47.01	44.57
Os07t0512100-01	Rice	plastid	48.06	44.54
TraesCS2A01G224100.1	Wheat	plastid	47.18	44.37
TraesCS2B01G274300.1	Wheat	plastid	47.18	44.3
TraesCS2D01G230400.1	Wheat	plastid	46.65	43.87
Zm00001d021613_P001	Maize	plastid	46.65	43.09
EER99440	Sorghum	plastid	46.65	43.09
KRG92643	Soybean	cytosol	47.54	41.86
KRG90233	Soybean	cytosol	47.18	41.29
KRG90235	Soybean	nucleus	39.79	41.24
KRH33461	Soybean	cytosol	46.83	40.99
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	39.79	40.57
KRH68787	Soybean	nucleus	48.94	40.35
KRH34141	Soybean	plastid	48.24	37.79
KRG97040	Soybean	nucleus	18.84	34.74

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:106794173	MapMan:35.2	EMBL:ACUP02004727	InterPro:ANKRD13	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_07G261200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	UniProt:I1KND7	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	EnsemblPlants:KRH51100	ProteinID:KRH51100	ProteinID:KRH51100.1	PFAM:PF11904
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF7	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI000294E154	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:43640168..43642432

Molecular Weight (calculated)

64111.4 Da

IEP (calculated)

10.022

GRAVY (calculated)

-0.471

Length

568 amino acids

Sequence
(BLAST)

001: MARSTTPPTI KPENYGHSPV HYAVALGDHT TLSRITSSLP RLPDPSLIQT ESDSLAQEKI ADQISLVLDR RDVPYRETPL HLAVRLNDLF AARALATAGA
101: DVSLQNSAGW NSLQEALCRR ASDIALVLLR LHHRNAWSKW RRRLPRVIAA LRRMRDFYME ISFHFESSVI PFVGKIAPSD TYKIWKRDGN LRADTSLAGF
201: DGLKIQRADQ SFLFLGDVDH THDVPSGSLL VLNRDDRKIF DAFENAGGPM NESDVAGFCS QTSVYRPGMD VTKAELVGRT NWRRQEKIES VGEWKAKVYE
301: MHNVVFSFRS RKVAGGDSDV AGSEQVLPLE LDEDDDGFLV AENPNFGFPM PDKRRHSSFV REEREWVPMG RKSVDLTSVT APQPRRSPQS VTMPQTKEKE
401: YVRSLRPSVW LTEQFPLKTE ELLPLLDILA NKVKAVRRLR ELLTTTFPPG TFPVKVAIPV VPTVRVVITF TKFVELQPLE QFYTPFSSPR HLLLSASRGG
501: DEQQSKAENR CSSSSSSTWL RRNNSVSNKQ RCMALDSDPF AIPAGYTWTS VDDKSRKMKK SKSVRKSK

Best Arabidopsis Sequence Match ( AT1G62050.1 )
(BLAST)

001: MARPSSASAT TAIRPEDYSH SPVHYAVVLG DHGALTRLLS SLPKLGDPEQ IRTESDSLSQ ERVADQISAV LDRRDVPSRE TPLHLAVRLD DLFAARAISS
101: AGGDISLQNA SGWNPLQEAF CRRNSEVMKV LLRHHHRLAW CKWRRRLPRL IAVLRRMRDF YMEISFHFES SVIPFVGKIA PSDTYKIWKR DGNLRADTTL
201: AGFDGLKIQR ADQSFLFLGD GDESLDISPG SLLVLNRDDR KILDAFESAG APISDSDIAG FCSQSSLYRP GMDVTKAELV GRTNWRRQEK MENVGEWKAR
301: VYEIQKVTFS FRSRKIVTGD GSEQVLPLEL DEDDEGFLVA ENPSFLAPPP RSQRRHSSFV KEDRDWISVG RKSVDVYPSA APPPPRQSQS PRRSVSQFQP
401: PRRSMAQVQP PRRSVAQAQP PRRSVALPST VSPVNPPPSP QIKEKEFVKS LHPSVWLTEQ FPLKTEELLP LLDILANKVK AVARMRDLLT TKFPPGTFPV
501: KLSIPVVPTV KVVITFTKFV ELPPAETFYT PLSSPRFLYS ATAGEEDHSD GEKPDARNSI SRPSTWLRLA TGKGSHRRVE EEEQQTPDPF AIPIGYKWTS
601: MSSSNSKSGN SSKMKKSKST KRTK

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q94CF4]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.