Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g080610.2.1 | Tomato | cytosol | 77.01 | 60.68 |
| KRH51100 | Soybean | cytosol | 57.7 | 46.83 |
| VIT_10s0116g01680.t01 | Wine grape | nucleus | 59.0 | 46.42 |
| KRH02059 | Soybean | cytosol | 56.18 | 46.09 |
| CDY07249 | Canola | cytosol, plastid | 55.97 | 45.34 |
| KRH36464 | Soybean | plastid | 56.83 | 45.25 |
| KRH11439 | Soybean | nucleus | 56.62 | 44.31 |
| Bra034461.1-P | Field mustard | cytosol | 56.18 | 43.9 |
| CDY24874 | Canola | cytosol | 55.97 | 43.73 |
| AT1G62050.1 | Thale cress | cytosol, nucleus, plastid | 56.83 | 41.99 |
| GSMUA_Achr2P13940_001 | Banana | cytosol | 41.21 | 33.16 |
| TraesCS2B01G274300.1 | Wheat | plastid | 39.91 | 30.41 |
| HORVU2Hr1G046900.2 | Barley | plastid | 39.48 | 30.38 |
| TraesCS2A01G224100.1 | Wheat | plastid | 39.7 | 30.3 |
| TraesCS2D01G230400.1 | Wheat | plastid | 39.48 | 30.13 |
| EER99440 | Sorghum | plastid | 39.91 | 29.92 |
| Os07t0512100-01 | Rice | plastid | 39.26 | 29.53 |
| Zm00001d021613_P001 | Maize | plastid | 39.26 | 29.43 |
| PGSC0003DMT400025371 | Potato | cytosol | 37.96 | 28.83 |
| PGSC0003DMT400076190 | Potato | cytosol | 39.91 | 28.22 |
| PGSC0003DMT400060183 | Potato | nucleus | 39.7 | 27.81 |
| PGSC0003DMT400042419 | Potato | extracellular, plasma membrane, plastid | 1.52 | 5.15 |
| PGSC0003DMT400025373 | Potato | nucleus | 1.3 | 4.44 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.2 | InterPro:ANKRD13 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0048046 |
| InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | UniProt:M1BD00 | PFAM:PF11904 | EnsemblPlantsGene:PGSC0003DMG401016449 |
| PGSC:PGSC0003DMG401016449 | EnsemblPlants:PGSC0003DMT400042418 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR12447 | PANTHER:PTHR12447:SF7 |
| SMART:SM00248 | SUPFAM:SSF48403 | UniParc:UPI000296757E | SEG:seg | : | : |
Description
Ankyrin repeat family protein [Source:PGSC_GENE;Acc:PGSC0003DMG401016449]
Coordinates
chr2:-:36402776..36404161
Molecular Weight (calculated)
49286.9 Da
IEP (calculated)
7.327
GRAVY (calculated)
-0.428
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRPAATSPA TTIKPEDYTH SPVHYAIVLG DHSTLSRLVA SLPRLADPTR IQTEADSLAQ ERSAEKIAAV LDRRDNPKRE TPLHLAVRLN DVYAARTLAV
101: AGADISLQNA AGWNALQEAI MRRCSDVVSI LVQHHHLGAW SKWRRRLPRL VAVLRRMRDF YMEISFHFES SIVPFVGKIA PSDTYKIWKR DGNLRADTSL
201: AGYDGLKVQR ANQSFLFLGD GDRNSDIPAG SLLVLNHDDR KMYDAFENAG SPLSDSDVAS FCNQTSVYRP GMDVTKSTLV GRTNWRGQDK TENVGEWKAR
301: VYDVNNVVFS FRSRKISAAE SEQILPLDLE LEEDSEDGFL VAENPRFSVS TAAASVGDSN KQRRHSSFTR EERDFVTVSR KSVDIIPEPR RRAAAVRGGP
401: XXXXXXXXXX XXXXXTTAES GGDTGCTAAK YEGEGICEEP KTVSLVNRAI PVEDGRVAAV T
101: AGADISLQNA AGWNALQEAI MRRCSDVVSI LVQHHHLGAW SKWRRRLPRL VAVLRRMRDF YMEISFHFES SIVPFVGKIA PSDTYKIWKR DGNLRADTSL
201: AGYDGLKVQR ANQSFLFLGD GDRNSDIPAG SLLVLNHDDR KMYDAFENAG SPLSDSDVAS FCNQTSVYRP GMDVTKSTLV GRTNWRGQDK TENVGEWKAR
301: VYDVNNVVFS FRSRKISAAE SEQILPLDLE LEEDSEDGFL VAENPRFSVS TAAASVGDSN KQRRHSSFTR EERDFVTVSR KSVDIIPEPR RRAAAVRGGP
401: XXXXXXXXXX XXXXXTTAES GGDTGCTAAK YEGEGICEEP KTVSLVNRAI PVEDGRVAAV T
001: MARPSSASAT TAIRPEDYSH SPVHYAVVLG DHGALTRLLS SLPKLGDPEQ IRTESDSLSQ ERVADQISAV LDRRDVPSRE TPLHLAVRLD DLFAARAISS
101: AGGDISLQNA SGWNPLQEAF CRRNSEVMKV LLRHHHRLAW CKWRRRLPRL IAVLRRMRDF YMEISFHFES SVIPFVGKIA PSDTYKIWKR DGNLRADTTL
201: AGFDGLKIQR ADQSFLFLGD GDESLDISPG SLLVLNRDDR KILDAFESAG APISDSDIAG FCSQSSLYRP GMDVTKAELV GRTNWRRQEK MENVGEWKAR
301: VYEIQKVTFS FRSRKIVTGD GSEQVLPLEL DEDDEGFLVA ENPSFLAPPP RSQRRHSSFV KEDRDWISVG RKSVDVYPSA APPPPRQSQS PRRSVSQFQP
401: PRRSMAQVQP PRRSVAQAQP PRRSVALPST VSPVNPPPSP QIKEKEFVKS LHPSVWLTEQ FPLKTEELLP LLDILANKVK AVARMRDLLT TKFPPGTFPV
501: KLSIPVVPTV KVVITFTKFV ELPPAETFYT PLSSPRFLYS ATAGEEDHSD GEKPDARNSI SRPSTWLRLA TGKGSHRRVE EEEQQTPDPF AIPIGYKWTS
601: MSSSNSKSGN SSKMKKSKST KRTK
101: AGGDISLQNA SGWNPLQEAF CRRNSEVMKV LLRHHHRLAW CKWRRRLPRL IAVLRRMRDF YMEISFHFES SVIPFVGKIA PSDTYKIWKR DGNLRADTTL
201: AGFDGLKIQR ADQSFLFLGD GDESLDISPG SLLVLNRDDR KILDAFESAG APISDSDIAG FCSQSSLYRP GMDVTKAELV GRTNWRRQEK MENVGEWKAR
301: VYEIQKVTFS FRSRKIVTGD GSEQVLPLEL DEDDEGFLVA ENPSFLAPPP RSQRRHSSFV KEDRDWISVG RKSVDVYPSA APPPPRQSQS PRRSVSQFQP
401: PRRSMAQVQP PRRSVAQAQP PRRSVALPST VSPVNPPPSP QIKEKEFVKS LHPSVWLTEQ FPLKTEELLP LLDILANKVK AVARMRDLLT TKFPPGTFPV
501: KLSIPVVPTV KVVITFTKFV ELPPAETFYT PLSSPRFLYS ATAGEEDHSD GEKPDARNSI SRPSTWLRLA TGKGSHRRVE EEEQQTPDPF AIPIGYKWTS
601: MSSSNSKSGN SSKMKKSKST KRTK
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q94CF4]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.