Factsheet for HORVU2Hr1G046900.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G224100.1	Wheat	plastid	96.83	96.03
TraesCS2D01G230400.1	Wheat	plastid	96.16	95.36
TraesCS2B01G274300.1	Wheat	plastid	96.16	95.21
Os07t0512100-01	Rice	plastid	86.14	84.18
Zm00001d021613_P001	Maize	plastid	86.14	83.9
EER99440	Sorghum	plastid	85.98	83.74
GSMUA_Achr2P13940_001	Banana	cytosol	49.08	51.31
KRH51100	Soybean	cytosol	44.57	47.01
KRH02059	Soybean	cytosol	44.07	46.98
KRH36464	Soybean	plastid	45.24	46.8
KRH11439	Soybean	nucleus	44.91	45.67
VIT_10s0116g01680.t01	Wine grape	nucleus	44.57	45.56
CDY07249	Canola	cytosol, plastid	42.4	44.64
HORVU2Hr1G052030.1	Barley	cytosol	7.51	44.55
CDY24874	Canola	cytosol	43.24	43.9
Bra034461.1-P	Field mustard	cytosol	43.07	43.73
Solyc02g080610.2.1	Tomato	cytosol	42.07	43.08
VIT_00s1428g00010.t01	Wine grape	cytosol, plastid	15.53	43.06
Bra016817.1-P	Field mustard	cytosol	35.56	41.44
AT1G62050.1	Thale cress	cytosol, nucleus, plastid	42.9	41.19
CDY21008	Canola	cytosol	35.06	40.86
CDY31210	Canola	nucleus	34.56	39.88
Bra019833.1-P	Field mustard	cytosol	37.9	39.82
PGSC0003DMT400042419	Potato	extracellular, plasma membrane, plastid	9.02	39.71
PGSC0003DMT400042418	Potato	cytosol, plastid	30.38	39.48
AT1G11740.1	Thale cress	cytosol	39.23	36.49
CDX97982	Canola	cytosol, nucleus, peroxisome	38.4	35.99
HORVU6Hr1G089010.1	Barley	nucleus	38.4	30.22
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	37.9	23.45

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	EMBL:AK359354	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	UniProt:F2D644	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU2Hr1G046900
EnsemblPlants:HORVU2Hr1G046900.2	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF11904	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF7	SUPFAM:SSF48403	UniParc:UPI00020056AC	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D644]

Coordinates

chrchr2H:-:255503573..255506820

Molecular Weight (calculated)

65394.8 Da

IEP (calculated)

10.156

GRAVY (calculated)

-0.320

Length

599 amino acids

Sequence
(BLAST)

001: MSVQDPSPAP RPKRTSSAPI RPCDYAHSPA HHCVALRDAA GISAILAGLP PLAHPSRILS AADAAREARL SASVSAALDR RDVPGGDTAL HLAVRLRLPS
101: LASALAAAGA DPTLQNHAGW TPLQEALCLG CKDIAAFLLR AHRLAAWAKL RRRAPALSAA LSRVQDFYLE VDFHFESSVV PLLSRAAPSD TYRIWKRGAN
201: LRADTTLAGF DGLRIRRADH SFLFFGEETE AGGRRLPPGS LLVLHRGKRE VHDAFAAAAA AGDEDAATSD AAAYRPGLNI TSARLVQRTT WLRKEKTESV
301: GEWKARVFDV HNVVFSFRTL KAASTGRKDL TFEFAGDDDE EFLPLEIRDD DEDGDFLVAD IPPPPPRRSC YVPGRRSVAG PPSHMGTPQR RRNSVDVPRR
401: LPTCASVGRG EDGVFSRNAT TGGAKWKEEE TVKTLRPTVW LTEDFPLSVD EFLPLLDILA TRVRAVRRLR ELLTTKFPTG TFPVKVAIPV VPTVRVVITF
501: NKFVPLVEPE EFFTPMSSPS LLASPGPGSI MPKPDTHKSS YLRWTSKNSR AKPVNLSQVA DNTDPFTIPS DYTWVNLGAT KSQDKKLSKT SKKGKSKET

Best Arabidopsis Sequence Match ( AT1G62050.1 )
(BLAST)

001: MARPSSASAT TAIRPEDYSH SPVHYAVVLG DHGALTRLLS SLPKLGDPEQ IRTESDSLSQ ERVADQISAV LDRRDVPSRE TPLHLAVRLD DLFAARAISS
101: AGGDISLQNA SGWNPLQEAF CRRNSEVMKV LLRHHHRLAW CKWRRRLPRL IAVLRRMRDF YMEISFHFES SVIPFVGKIA PSDTYKIWKR DGNLRADTTL
201: AGFDGLKIQR ADQSFLFLGD GDESLDISPG SLLVLNRDDR KILDAFESAG APISDSDIAG FCSQSSLYRP GMDVTKAELV GRTNWRRQEK MENVGEWKAR
301: VYEIQKVTFS FRSRKIVTGD GSEQVLPLEL DEDDEGFLVA ENPSFLAPPP RSQRRHSSFV KEDRDWISVG RKSVDVYPSA APPPPRQSQS PRRSVSQFQP
401: PRRSMAQVQP PRRSVAQAQP PRRSVALPST VSPVNPPPSP QIKEKEFVKS LHPSVWLTEQ FPLKTEELLP LLDILANKVK AVARMRDLLT TKFPPGTFPV
501: KLSIPVVPTV KVVITFTKFV ELPPAETFYT PLSSPRFLYS ATAGEEDHSD GEKPDARNSI SRPSTWLRLA TGKGSHRRVE EEEQQTPDPF AIPIGYKWTS
601: MSSSNSKSGN SSKMKKSKST KRTK

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q94CF4]
SUBAcon: [cytosol,nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.