CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11439	Soybean	nucleus	86.7	85.23
KRH51100	Soybean	cytosol	73.58	75.0
KRH02059	Soybean	cytosol	70.98	73.13
Solyc02g080610.2.1	Tomato	cytosol	64.42	63.76
PGSC0003DMT400042418	Potato	cytosol, plastid	45.25	56.83
GSMUA_Achr2P13940_001	Banana	cytosol	49.05	49.56
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	24.18	48.44
HORVU2Hr1G046900.2	Barley	plastid	46.8	45.24
TraesCS2A01G224100.1	Wheat	plastid	46.8	44.87
TraesCS2B01G274300.1	Wheat	plastid	46.8	44.79
TraesCS2D01G230400.1	Wheat	plastid	46.46	44.54
Os07t0512100-01	Rice	plastid	46.63	44.05
Zm00001d021613_P001	Maize	plastid	46.63	43.9
EER99440	Sorghum	plastid	46.46	43.74
KRG92643	Soybean	cytosol	46.63	41.86
KRG90235	Soybean	nucleus	38.69	40.88
KRG90233	Soybean	cytosol	45.42	40.52
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	38.86	40.4
KRH33461	Soybean	cytosol	45.08	40.22
KRH68787	Soybean	nucleus	46.8	39.33
KRH34141	Soybean	plastid	46.29	36.97
KRG97040	Soybean	nucleus	18.48	34.74

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100797386	MapMan:35.2	EMBL:ACUP02005375	InterPro:ANKRD13	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_09G004100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	UniProt:I1KZT0	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	EnsemblPlants:KRH36464	ProteinID:KRH36464	ProteinID:KRH36464.1	PFAM:PF11904
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF7	SUPFAM:SSF48403	UniParc:UPI00023391A0
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:323478..325986

Molecular Weight (calculated)

64171.2 Da

IEP (calculated)

10.180

GRAVY (calculated)

-0.396

Length

579 amino acids

Sequence
(BLAST)

001: MAKSSKNPTT SYPAIKAEQY LHSPVHYALA IRDHTKLSRI ISSLPRVPDP ARVITESDSL SQDRVGEKIS AVLDRRDVPF RETPLHLAVR LNDVAAARAI
101: ASAGADISLH NAAGWNPLQE ALCLRASDIA QVLVRLHHRA AWAKWRRRLP RLVAALRRMR DFYMEISFHF ESSVIPFVGK IAPSDTYKIW KRDGNLRADT
201: TLAGFDGLKI HRANQSFLFL GDGDAIAGVP AGSLLVLNRD DKKIFDAFEN AGAPMSDSDA AGFCSQSSVY RPGMDVTKAE LVGRTNWRRQ EKMENVGEWK
301: ARVYEVHNVV FSFRSRKVTG GESDVAGSEQ VLPLELDEDE DGFLVAENPS FGMPLGSNNS DKRRHSSFVR EEREWVPIGR KSVDFPSVSV APPRRSSAAA
401: AAPAAPLTKE KEYLRSLRPA VWLTEQFPLK TEELLPLLDI LANKVKAVRR LRELLTTKFP PGSFPVKVAI PVVPTVRVVV TFTKFVELQP VEKFYTPLSS
501: PTHLLNADDD DPSGRSTCLR RTSTSHSWGG GSKHQQRSSS SSGALDSDPF AIPVGYTWTN NGDDSSRKLN KSKSVRKSK

Best Arabidopsis Sequence Match ( AT1G62050.1 )
(BLAST)

001: MARPSSASAT TAIRPEDYSH SPVHYAVVLG DHGALTRLLS SLPKLGDPEQ IRTESDSLSQ ERVADQISAV LDRRDVPSRE TPLHLAVRLD DLFAARAISS
101: AGGDISLQNA SGWNPLQEAF CRRNSEVMKV LLRHHHRLAW CKWRRRLPRL IAVLRRMRDF YMEISFHFES SVIPFVGKIA PSDTYKIWKR DGNLRADTTL
201: AGFDGLKIQR ADQSFLFLGD GDESLDISPG SLLVLNRDDR KILDAFESAG APISDSDIAG FCSQSSLYRP GMDVTKAELV GRTNWRRQEK MENVGEWKAR
301: VYEIQKVTFS FRSRKIVTGD GSEQVLPLEL DEDDEGFLVA ENPSFLAPPP RSQRRHSSFV KEDRDWISVG RKSVDVYPSA APPPPRQSQS PRRSVSQFQP
401: PRRSMAQVQP PRRSVAQAQP PRRSVALPST VSPVNPPPSP QIKEKEFVKS LHPSVWLTEQ FPLKTEELLP LLDILANKVK AVARMRDLLT TKFPPGTFPV
501: KLSIPVVPTV KVVITFTKFV ELPPAETFYT PLSSPRFLYS ATAGEEDHSD GEKPDARNSI SRPSTWLRLA TGKGSHRRVE EEEQQTPDPF AIPIGYKWTS
601: MSSSNSKSGN SSKMKKSKST KRTK

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q94CF4]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.