CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
endoplasmic reticulum 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	88.32	86.89
GSMUA_Achr5P13140_001	Banana	mitochondrion	49.45	51.23
HORVU2Hr1G052030.1	Barley	cytosol	9.12	49.51
GSMUA_Achr1P01140_001	Banana	cytosol	49.27	49.36
GSMUA_Achr4P26640_001	Banana	cytosol	51.64	47.09
CDX85149	Canola	nucleus, plastid	49.27	45.69
AT3G24210.1	Thale cress	nucleus	50.55	45.63
KRG90233	Soybean	cytosol	53.65	45.3
KRH33461	Soybean	cytosol	53.47	45.15
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	22.81	43.25
CDY45348	Canola	cytosol	45.26	42.91
CDX89790	Canola	cytosol	49.09	42.43
CDY18256	Canola	cytosol	49.82	42.39
Zm00001d019522_P001	Maize	cytosol	50.55	42.35
Bra015348.1-P	Field mustard	cytosol	50.37	42.2
Os07t0436100-01	Rice	cytosol	50.37	42.07
EER98424	Sorghum	cytosol	49.82	41.94
AT1G04780.1	Thale cress	cytosol	50.73	41.87
Zm00001d005442_P001	Maize	cytosol	49.45	41.25
TraesCS2A01G237500.1	Wheat	cytosol	48.36	40.46
TraesCSU01G145200.1	Wheat	cytosol	48.18	40.31
TraesCS2D01G236000.1	Wheat	cytosol	47.99	40.03
KRH51100	Soybean	cytosol	41.24	39.79
KRH02059	Soybean	cytosol	40.33	39.32
KRH36464	Soybean	plastid	40.88	38.69
KRG92643	Soybean	cytosol	45.07	38.29
KRH11439	Soybean	nucleus	41.06	38.2
KRH68787	Soybean	nucleus	46.53	37.01
KRH34141	Soybean	plastid	45.8	34.62
KRG97040	Soybean	nucleus	17.52	31.17
CDX77466	Canola	plastid	48.54	24.79
Bra015003.1-P	Field mustard	cytosol, plastid	48.91	24.01

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100795163	MapMan:35.2	EMBL:ACUP02012567	InterPro:ANKRD13	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_20G076600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	UniProt:K7N264	EnsemblPlants:KRG90235	ProteinID:KRG90235	ProteinID:KRG90235.1	PFAM:PF11904
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI000233DD20	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:27732401..27736952

Molecular Weight (calculated)

61649.9 Da

IEP (calculated)

10.112

GRAVY (calculated)

-0.591

Length

548 amino acids

Sequence
(BLAST)

001: MAGINVSEYA HSSVHKAIIL KDHAGLKEIL GVLPKLGNPL EIKTEAASIA EDEKAAAISV VVDRRDVPHG DTPLHMAAKL GDIVATEMLM DAGANGRLKN
101: KEGWTAVRQA IINKQDKIAM VMIKYSWNDP DNKYFRRLPR YIGTMRRMKD FYMEISFHFE SSVIPFISRI APSDTYKIWK KGGNMRADMT LAGFDGLKIK
201: RSNQSVLFLG DGTSDDESKF PGSLFKVLHK EKKVYVVSPS LDAPTDRDVK DTLAKKSRSE SVRRVGLDVS QALLVPQLTW RRKERKEMVG PWKAKVYDMQ
301: NVVFSVKSRR IPGAPPPEAK PAPKKTKKKD NGKIEDILTD EERKQFEAAM NSSDDNGHSH NRAKKEKKGR SGGHRDHKER KTNSAQPAEH FVNQKGESQF
401: KRGMMPALWL SQNFPLKIDE LLPMLDILAE KLKAVRRLRE LLTTKLPKES FPVKVAIPVV STVRVLVTFT KFEEIQHENA DEFESAPSSP TSGDQENPEE
501: ERSSSSSWFG WIKTPSRSST TCAESSSKIF DAEDLFAIPS GFKWITIE

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.