Factsheet for Bra015348.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89790	Canola	cytosol	91.28	94.16
AT1G04780.1	Thale cress	cytosol	80.43	79.22
GSMUA_Achr5P13140_001	Banana	mitochondrion	57.95	71.64
VIT_05s0136g00240.t01	Wine grape	cytosol	67.58	67.79
GSMUA_Achr4P26640_001	Banana	cytosol	61.93	67.39
Solyc09g091560.2.1	Tomato	cytosol	65.75	65.95
PGSC0003DMT400076190	Potato	cytosol	65.6	65.8
GSMUA_Achr1P01140_001	Banana	cytosol	53.21	63.62
EER98424	Sorghum	cytosol	63.0	63.29
Os07t0436100-01	Rice	cytosol	63.0	62.8
Zm00001d019522_P001	Maize	cytosol	62.54	62.54
Zm00001d005442_P001	Maize	cytosol	62.23	61.95
TraesCS2D01G236000.1	Wheat	cytosol	61.01	60.73
TraesCS2A01G237500.1	Wheat	cytosol	60.7	60.61
TraesCSU01G145200.1	Wheat	cytosol	60.09	60.0
Bra036125.1-P	Field mustard	nucleus	51.22	54.38
Bra010013.1-P	Field mustard	nucleus	52.6	53.09
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	43.88	51.53
KRG90235	Soybean	nucleus	42.2	50.37
HORVU2Hr1G052030.1	Barley	cytosol	7.34	47.52
Bra034461.1-P	Field mustard	cytosol	39.45	43.73
Bra016817.1-P	Field mustard	cytosol	33.03	42.02
Bra019833.1-P	Field mustard	cytosol	36.39	41.75
Bra015003.1-P	Field mustard	cytosol, plastid	59.33	34.77

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlantsGene:Bra015348	EnsemblPlants:Bra015348.1	EnsemblPlants:Bra015348.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	UniProt:M4DFS5	PFAM:PF11904	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0002543CC1	SEG:seg

Description

AT1G04780 (E=2e-271) | ankyrin repeat family protein

Coordinates

chrA10:+:2341019..2343063

Molecular Weight (calculated)

73090.3 Da

IEP (calculated)

8.641

GRAVY (calculated)

-0.630

Length

654 amino acids

Sequence
(BLAST)

001: MASVIDVTNY GHSPVHRAVV TRDYAALKKL LSSLPKMRDP SEVKTEAASV SEETKADSIA SVIDRRDVIN RDTALHLAVK LGDETSAEML MVAGADWSLQ
101: NEQGWSALQE AICGREERIA MIIVKHYQPL AWAKWCRRLP RLVATMHRMR DFYMEITFHF ESSVIPFISR VAPSDTYKIW KRGANLRADM TLAGFDGFRI
201: QRSDQTILFL GDGSEDGKVP SGSLLMISHK DKEIMNALDG AGSPASEDEV RGEVAAMSKT SIFRPGIDVT QAVLFPQLTW RRQEKSEMVG EWKAKVYDMH
301: NVVVSIKSRR VPGAMSDEEL FSNNNNQENE TESEDLGDVL TEDERKQLEL ALKVDSPEGG SCNTPHVDRD IPIMDGNGYC NKQEKKGWFG GWRKRDEGHS
401: KRSSVPPRSS LCVDEKKVSD LLEDDGRRQV KPGRHSTADT LTRDSSSKAS TSEGSGSSTS KRKEGSSSSS SRENEYKKGL RPVLWLSERF PLQTKELLPL
501: LDILANKVKA IRRLRELMTT KLPSGTFPVK VAIPVIPTIR VLVTFTKFEE LEAIEDEFVT PPSSPTSSNV RNSPREETQF SSSSSSSSWF QWIKTPSQRP
601: SASFSSGGFS IGKAENDQDP FAIPRGYNWI TSEEKKKKIQ EKNKAKKNKS AQNS

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.