Factsheet for GSMUA_Achr5P13140_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
endoplasmic reticulum 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P26640_001	Banana	cytosol	88.47	77.87
GSMUA_Achr1P01140_001	Banana	cytosol	79.58	76.97
EER98424	Sorghum	cytosol	82.04	66.67
Os07t0436100-01	Rice	cytosol	81.47	65.7
Zm00001d019522_P001	Maize	cytosol	80.34	64.98
Zm00001d005442_P001	Maize	cytosol	79.96	64.38
HORVU2Hr1G052030.1	Barley	cytosol	12.29	64.36
TraesCSU01G145200.1	Wheat	cytosol	79.02	63.82
TraesCS2A01G237500.1	Wheat	cytosol	79.02	63.82
TraesCS2D01G236000.1	Wheat	cytosol	79.21	63.77
VIT_05s0136g00240.t01	Wine grape	cytosol	77.69	63.04
Solyc09g091560.2.1	Tomato	cytosol	75.61	61.35
PGSC0003DMT400076190	Potato	cytosol	75.43	61.2
KRG90233	Soybean	cytosol	73.53	59.94
KRH33461	Soybean	cytosol	73.16	59.63
CDY18256	Canola	cytosol	72.02	59.16
CDX89790	Canola	cytosol	70.7	58.99
Bra015348.1-P	Field mustard	cytosol	71.64	57.95
AT1G04780.1	Thale cress	cytosol	72.4	57.68
CDX85149	Canola	nucleus, plastid	63.89	57.19
AT3G24210.1	Thale cress	nucleus	62.95	54.86
GSMUA_Achr10P...	Banana	nucleus	62.57	53.91
GSMUA_Achr11P...	Banana	nucleus	64.46	53.2
CDY45348	Canola	cytosol	57.84	52.94
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	53.31	50.63
KRG90235	Soybean	nucleus	51.23	49.45
GSMUA_Achr2P13940_001	Banana	cytosol	47.64	43.98
CDX77466	Canola	plastid	61.81	30.48
Bra015003.1-P	Field mustard	cytosol, plastid	62.95	29.84

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr5G13140_001	EnsemblPlants:GSMUA_Achr5P13140_001	EnsemblPlants:GSMUA_Achr5T13140_001
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0SY43	PFAM:PF11904	PFAM:PF12796
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI00029531CC	SEG:seg	:	:	:	:

Description

ankyrin repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G13140_001]

Coordinates

chr5:-:9367098..9370903

Molecular Weight (calculated)

59481.3 Da

IEP (calculated)

7.607

GRAVY (calculated)

-0.431

Length

529 amino acids

Sequence
(BLAST)

001: MAGTDLIKYA HSPAHRAVLA RDYAGLKRVL AALPRLVDPS AIRTEAASVA EEEKADAISA VIDRRDVPNR ETPLHLAVRL GDAAAVEMLM AAGADWSLQN
101: EQGWSALQEA ICAGEENLAK IIVRHYQPLA WAKWCRRLPR VVATMRRMRD FYMEITFHFE SSVIPFISRI APSDTYKIWK RGSNLRADMT LAGFDGFRIQ
201: RSDQSILFLG DGSEDGKVPP GSLCMISHKD KEVMNALDGA GTPATEAEVH QEVKAMSQTN IFRPGIDVTQ AVLLPQLTWR RQERSEMVGP WKAKVYDMHN
301: VVVSVKSRRV PGAMTDEELF SACNDNETES EDFEDILTEE ERKQLEKALK MESPEVIDQN SKESEYRKGL RPVLWLSPDF PLRTEELLPL LDILANKVKA
401: IRRLRDLLMT KLPPGAFPVK VAIPVVPTIR VLVTFTKFEE LQPLEEFSTP PTSPGNNSPQ TQTSSSSWIQ WIKAPYRQNY SITSGPSSRV EDIQDPFVIP
501: PDYSWTTPAA KRKKMQEKSK SKKGKGQNQ

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.