Factsheet for GSMUA_Achr1P01140_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
endoplasmic reticulum 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P13140_001	Banana	mitochondrion	76.97	79.58
GSMUA_Achr4P26640_001	Banana	cytosol	78.79	71.71
HORVU2Hr1G052030.1	Barley	cytosol	12.07	65.35
EER98424	Sorghum	cytosol	73.67	61.9
Os07t0436100-01	Rice	cytosol	73.31	61.13
Zm00001d019522_P001	Maize	cytosol	72.76	60.86
Zm00001d005442_P001	Maize	cytosol	71.66	59.67
TraesCSU01G145200.1	Wheat	cytosol	71.3	59.54
TraesCS2A01G237500.1	Wheat	cytosol	71.3	59.54
TraesCS2D01G236000.1	Wheat	cytosol	71.12	59.21
VIT_05s0136g00240.t01	Wine grape	cytosol	70.02	58.74
Solyc09g091560.2.1	Tomato	cytosol	68.92	57.82
PGSC0003DMT400076190	Potato	cytosol	68.56	57.52
KRG90233	Soybean	cytosol	67.09	56.55
KRH33461	Soybean	cytosol	66.54	56.09
CDX85149	Canola	nucleus, plastid	59.6	55.16
CDY18256	Canola	cytosol	63.99	54.35
CDX89790	Canola	cytosol	62.34	53.79
AT3G24210.1	Thale cress	nucleus	59.6	53.71
Bra015348.1-P	Field mustard	cytosol	63.62	53.21
AT1G04780.1	Thale cress	cytosol	64.53	53.16
GSMUA_Achr10P...	Banana	nucleus	57.59	51.3
CDY45348	Canola	cytosol	53.75	50.87
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	51.19	50.27
GSMUA_Achr11P...	Banana	nucleus	58.32	49.77
KRG90235	Soybean	nucleus	49.36	49.27
GSMUA_Achr2P13940_001	Banana	cytosol	44.61	42.58
CDX77466	Canola	plastid	58.14	29.64
Bra015003.1-P	Field mustard	cytosol, plastid	57.95	28.41

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr1G01140_001	EnsemblPlants:GSMUA_Achr1P01140_001	EnsemblPlants:GSMUA_Achr1T01140_001
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0RW22	PFAM:PF11904	PFAM:PF12796
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI00029684F4	SEG:seg	:	:	:	:

Description

ankyrin repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G01140_001]

Coordinates

chr1:-:833783..835950

Molecular Weight (calculated)

61112.3 Da

IEP (calculated)

9.853

GRAVY (calculated)

-0.432

Length

547 amino acids

Sequence
(BLAST)

001: MAGMDPSKYA HSPAHKAVLA RDYAGLKRVL AALPRLADPS SIRTEAASFA EEEKAEAISA VVDRRDVPNR ETPLHLAVRL GDAAAVEMLM AAGADYSLQN
101: EQGWSALQEA ICAREENLAK IIIRHYQLLA WAKWCRRLPR VVATMRRMRD FYMEITFHFE SSVIPFISRI APSDTYKIWK RGSNLRADMT LAGFDGFRIQ
201: RSDQSILFLG DGSEDGKVPP GSLCVISHKD KVVMSALNGA GTPPTEAEVQ QEVAAMSQTN IFRPGIDVTQ AVLLPQLTWR RQERSEMVGP WKAKVYEMHH
301: VMVSMKSRQV PGAMTDEDAL KVKSPDMLDQ DACSSSSSRN NGQRKAVPPS VILVDSPPGH QSRPERRSIE VVKRPATSKE SEYRKGLRPI LWLSPDFPLQ
401: TEELLPLLDI LANKVKAIRR LRDLLTTKLP PGTFPVKVAI PVVPTIRVLV TFSKFEELQP LEEFWTPPSS PESSRTPETQ ASSSWIQWIK APYRQAYAAS
501: PGPGNRVEDV QDPFGIPPDY TWTTAEARRK KTQEGTSKSK QVKGRNR

Best Arabidopsis Sequence Match ( AT1G04780.1 )
(BLAST)

001: MASSTIDVTK YGHSPVHHAV VTRDYAGLKK LLSALPKMRD PSEVQNEAAS VAEETKADSI AAVIDRRDVV NRDTALHLAV KLGDETSAEM LMAAGADWSL
101: QNEHGWSALQ EAICGREERI AMIIVRHYQP LAWAKWCRRL PRLVATMHRM RDFYMEITFH FESSVIPFIS RVAPSDTYKI WKRGANLRAD MTLAGFDGFR
201: IQRSDQTILF LGDGSEDGKV PSGSLLMISH KDKEIMNALD GAGAAASEEE VRQEVAAMSK TSIFRPGIDV TQAVLFPQLT WRRQEKTEMV GQWKAKVYDM
301: HNVVVSIKSR RVPGAMTDEE LFSNTNQEND TESEDLGDIL TEDEKRQLEL ALKLDSPEES SNGESSRISQ KQNSCSFEDR EIPVTDGNGY CKQEKKGWFS
401: GWRKREEGHR RSSVPPRNSL CVDEKVSDLL GDDDSPSRGG RQIKPGRHST VETVVRNENR GLRDSSKAST SEGSGSSKRK EGNKENEYKK GLRPVLWLSE
501: RFPLQTKELL PLLDILANKV KAIRRLRELM TTKLPSGTFP VKVAIPVIPT IRVLVTFTKF EELEAIEDEF VTPPSSPTSS VKNSPREETQ SSSNPSSSWF
601: QWIKTPSQRP STSSSSGGFN IGKAENDQDP FAIPRGYNWI TAEEKKKKVQ EKNKAKKGKS SQNS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GXW8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.