Factsheet for Bra015003.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77466	Canola	plastid	94.0	97.76
AT3G24210.1	Thale cress	nucleus	42.47	78.09
GSMUA_Achr5P13140_001	Banana	mitochondrion	29.84	62.95
VIT_05s0136g00240.t01	Wine grape	cytosol	35.04	59.97
Bra015348.1-P	Field mustard	cytosol	34.77	59.33
GSMUA_Achr1P01140_001	Banana	cytosol	28.41	57.95
GSMUA_Achr4P26640_001	Banana	cytosol	31.18	57.9
EER98424	Sorghum	cytosol	33.06	56.68
Zm00001d019522_P001	Maize	cytosol	32.97	56.27
Solyc09g091560.2.1	Tomato	cytosol	32.8	56.13
PGSC0003DMT400076190	Potato	cytosol	32.71	55.98
Zm00001d005442_P001	Maize	cytosol	32.89	55.86
HORVU2Hr1G052030.1	Barley	cytosol	5.02	55.45
Os07t0436100-01	Rice	cytosol	32.35	55.03
TraesCS2A01G237500.1	Wheat	cytosol	31.99	54.5
TraesCS2D01G236000.1	Wheat	cytosol	32.08	54.49
TraesCSU01G145200.1	Wheat	cytosol	31.72	54.05
Bra036125.1-P	Field mustard	nucleus	27.24	49.35
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	24.55	49.19
KRG90235	Soybean	nucleus	24.01	48.91
Bra010013.1-P	Field mustard	nucleus	27.96	48.15
Bra034461.1-P	Field mustard	cytosol	23.12	43.73
Bra016817.1-P	Field mustard	cytosol	19.53	42.41
Bra019833.1-P	Field mustard	cytosol	21.51	42.11

Protein Annotations

Gene3D:1.25.40.20	Gene3D:3.50.50.60	MapMan:7.8.3.4	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra015003	EnsemblPlants:Bra015003.1	EnsemblPlants:Bra015003.1-P	InterPro:FAD-bd	InterPro:FAD/NAD-bd_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006744	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016491	GO:GO:0016709	GO:GO:0016712	GO:GO:0031314	GO:GO:0050660	GO:GO:0055114
GO:GO:0071949	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036188	InterPro:IPR036770	UniProt:M4DET1
HAMAP:MF_03193	PFAM:PF01494	PFAM:PF11904	PRINTS:PR00420	ScanProsite:PS01304	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51905
TIGRFAMs:TIGR01988	UniParc:UPI0002540D77	InterPro:UbQ_mOase_COQ6	InterPro:UbiH/COQ6	InterPro:Ubi_Hdrlase_CS	SEG:seg

Description

AT3G24210 (E=6e-275) | ankyrin repeat family protein

Coordinates

chrA07:-:4410378..4416095

Molecular Weight (calculated)

122864.0 Da

IEP (calculated)

8.431

GRAVY (calculated)

-0.374

Length

1116 amino acids

Sequence
(BLAST)

0001: MEGIDVSKYT HSPVHRAVAS RDHATLRSIL SSLPKPRDPS EIQSESDSLS EEATSDAISS VIDRRDVPRR DTPLHLAVKL CDATSAEMLM VAGADWTLQN
0101: EDGWNALQEA VCSRQESIAM IIVRHYQPLA WAKWCRRLPR LVATMRKMKD FYLEMSFHFE SSVVPFVSKV APSDTYKVWK VGSNLRADMT MAGFDGFKIQ
0201: RSDQSILFLG DGSEDGKVPR GSLYMVNHKD KEVMNALDGA SSVASDEDVK KEVAAMCRSN IFRPGIDVTQ AVLNPQTNWR RQEKSEMVGP WRAKVYEMNN
0301: VVVSIKSRKV PGSSGDKENG GGGGDDELCD VLTDEEQKQL EAALKLDLPE FPNVDSENGF VEAPCVDSSP SHKKQEKKGW LGGWRKKEAT MIKQEKEIKY
0401: APPRSSLCVN EKVSNLLGDT NQIKPGRHSV DNDHIRKPRV SSKSHQESEY KKGLRPVLWL STNFPLQTEE LLPLLDILAN KVKAIRRLRE LLTTKLPAGT
0501: FPVKVAIPVV PTIKVLVTFT KFEEVDPADE FKTPPSSPTA TCGYESPADF TNNASSSSWF RRARSNKDGS SRKSQTMQDP FAIPAGYTWG SRVEPVYSNL
0601: SIYVIKAANT MNRVLARQLR TNLCGSKHIF QRACSTHVTR KVSSTAGSNE TNANSTGDSP QHDIAIVGGG MVGIALAASL ASKPLTKHLN VAIIDNNPLL
0701: GRKNIIEKGH LPDPRVSTVT PATISFLKDI GAWKYIEEQR HAYFDKMQVW DYTGLGYTRY NAKDVDQDIL GCVVENKVLQ SSQLSCVQES DLQKTIYPAR
0801: LNAMGMLPSS SLTGLGEVPS TADLFMRGRL AKLELSDGNN VYAKLVVGAD GSKSRVRELA GIKTTGWNYS QNAIICTVEH TVENFTAWQR FLPNGPIALL
0901: PVGDKFSNIV WTMDPTEASD RKSMSEDDFI KAVNDALDYG YGPHPETTSS GGSSLSWLTG DVNISAKERF ETPPKVVKLS SERMVFPLSL RHAKDYVSNR
1001: VALVGDSAHT VHPLAGQGVN LGFADASALS RAIAEGIALG TDIGEANLLK RYEAERKPAN IAMMAVLDGI QKMYAVNFGP LNAFRAAAFH GAHYISPLKK
1101: RIISYASGEQ SLPLFS

Best Arabidopsis Sequence Match ( AT3G24210.1 )
(BLAST)

001: MENVDVSKYI HSSVHKAVAS KDYVGLRAIL SSLPKPKDPC EIQTEAASLS EEAKSDTISA VIDRRDVPSR DTPLHLAVKL CDSTSVEMLM VAGADWTLQN
101: EDGWNALQEA VCSRQEAIAM IIVRHYQPLA WAKWCRRLPR LIATMSKMKD FYLEMSFHFE SSVVPFVSKV APSDTYKVWK VGSNLRADMT MAGFDGFKIQ
201: RSDQSILFLG DGSEDGEVAR GSLYMVNHKD KEVMNALDGA CGVPSEEEVR KEVAAMCKSN IFRPGIDVTQ AVLSPQTNWR RQEKSEMVGP WKAKVYEMNN
301: VVVSVKSRKV PGSLAVEGGD DDICDVLTDE EQKQLEDALK LDLPDFPNVN GENGFIVHHQ EDHVEANKKA EKKGWLGGWR KKETKQEKQI QYAPPRSSLC
401: VNEKVSNLLG ESNQIKPGRH SVDNEHYRKP KALVSDKTRH ESEYKKGLRP VLWLSPNFPL QTEELLPLLD ILANKVKAIR RLRELLTTKL PSGTFPVKVA
501: IPVVPTIKVL VTFTKFEEIE PVDEFKTPLS SPTSSGYESP AAATTDFTNS SSSSSWFRRS RSNKDGGSSK SKTLQDPFAI PTGYTWVSLE SKKRKPKKGG
601: KKTEQVS

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4J6I7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.