CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92643	Soybean	cytosol	79.45	89.3
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	32.41	81.31
VIT_14s0036g01030.t01	Wine grape	nucleus	68.69	75.45
KRH68787	Soybean	nucleus	71.59	75.33
PGSC0003DMT400060183	Potato	nucleus	65.79	72.49
CDX86213	Canola	nucleus	62.48	72.36
Solyc05g054970.2.1	Tomato	extracellular, nucleus	65.66	72.34
CDY48669	Canola	nucleus	60.14	69.76
AT3G04470.1	Thale cress	nucleus	61.38	69.53
Bra036125.1-P	Field mustard	nucleus	59.03	69.48
Bra010013.1-P	Field mustard	nucleus	61.79	69.14
Os02t0810100-00	Rice	plasma membrane	60.28	69.04
EES05988	Sorghum	nucleus	60.0	68.94
Zm00001d051948_P001	Maize	cytosol	59.72	68.51
TraesCS6B01G417700.1	Wheat	nucleus	59.45	68.41
TraesCS6D01G363800.1	Wheat	nucleus	59.31	68.25
TraesCS6A01G379500.1	Wheat	nucleus	59.31	68.25
GSMUA_Achr11P...	Banana	nucleus	60.28	68.17
Zm00001d018443_P001	Maize	mitochondrion	59.17	67.99
GSMUA_Achr10P...	Banana	nucleus	57.52	67.92
PGSC0003DMT400025371	Potato	cytosol	54.76	65.4
PGSC0003DMT400025373	Potato	nucleus	12.0	64.44
KRG97040	Soybean	nucleus	26.21	61.69
CDY00019	Canola	mitochondrion	59.72	61.68
Solyc06g036630.1.1	Tomato	endoplasmic reticulum	12.83	61.18
CDY57011	Canola	nucleus, plastid	58.9	61.09
Solyc06g036620.1.1	Tomato	cytosol, nucleus, plastid	50.76	58.69
HORVU6Hr1G089010.1	Barley	nucleus	58.48	55.72
KRG90233	Soybean	cytosol	47.03	52.54
KRH33461	Soybean	cytosol	46.48	51.93
KRH02059	Soybean	cytosol	37.93	48.93
KRH51100	Soybean	cytosol	37.79	48.24
KRH33464	Soybean	cytoskeleton, cytosol, nucleus	35.86	46.68
KRH36464	Soybean	plastid	36.97	46.29
KRG90235	Soybean	nucleus	34.62	45.8
KRH11439	Soybean	nucleus	37.1	45.67

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100789308	MapMan:35.2	EMBL:ACUP02006582	InterPro:ANKRD13	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_10G165700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0016020	GO:GO:0016021
UniProt:I1LBP9	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	EnsemblPlants:KRH34141	ProteinID:KRH34141
ProteinID:KRH34141.1	PFAM:PF11904	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17
SMART:SM00248	SUPFAM:SSF48403	TMHMM:TMhelix	UniParc:UPI000233CDC9	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:39988983..39993106

Molecular Weight (calculated)

81287.5 Da

IEP (calculated)

7.335

GRAVY (calculated)

-0.576

Length

725 amino acids

Sequence
(BLAST)

001: MHLDLLTHSP NFHNSKSKNI TLCSKSSSAI TDLNPASPRK VFGAITDPNL KIDLIFAFSF FLLASITVMT VAAYIERERE QMEDISKYAH SPAHVAVARR
101: DHAALRHLVS TIPRLAKAGE VNTEAESLAA ELKADEVSTV IDRRDVPGRE TPLHLAVRLR DVVSAEILMT AGADWSLQNE HGWSALQEAV CTREEAIAVI
201: IARHYQPLAW AKWCRRLPRI VASAARIRDF YMEISFHFES SVIPFIGRIA PSDTYRIWKR GSNLRADMTL AGFDGFRIQR SDQTFLFLGE GYASEDGKLN
301: LPPGSLLALA HKEKEVTNAL EGAGTQPTEA EVNHEVSLMS QTNMYRPGID VTQAELVPHL NWRRQEKTEI VGNWKARVYD MLHVMVSVKS RRVPGAMTDE
401: ELFAVDDGES MVNGDNNDDQ YDDVLTAEER MQLDSALRMG NSDAICQDEE PGGGFDGHEN GSNGGGVKEK KVWFGWNKKN MKGGDEPEDL KTTKKFSGDQ
501: QKPQPQSEFV KEDPAETKKG KDKNIRRKKK KGGINESKNE SEFKKGLRPV LWLTPDFPLK TDELLPLLDI LANKVKAIRR LRELLTTKLP LGTFPVKVAI
601: PIVPTIRVLV TFTKFEDLQP AEEFSTPPSS PAYFQDAKSK ESEGSTSWIS WMKGSRGTQS SDSDSHKFKD EMDPFSIPSD YKWVDANERK RRMKAKRAKS
701: KKHKKQTVAK GGDGMQLGSD DVEEY

Best Arabidopsis Sequence Match ( AT3G04470.1 )
(BLAST)

001: MEDYSKYTHS PAHLAVVLRD HAALRRIVSD LPRLAKAGEV TTEAESMESE SRADSVSAVI DRRDVPGRET PLHLAVRLRD PVSAEILMSA GADWSLQNEN
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9M840]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.