Factsheet for TraesCS6B01G417700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G363800.1	Wheat	nucleus	99.21	99.21
TraesCS6A01G379500.1	Wheat	nucleus	98.89	98.89
Os02t0810100-00	Rice	plasma membrane	88.73	88.31
Zm00001d051948_P001	Maize	cytosol	88.57	88.29
EES05988	Sorghum	nucleus	88.25	88.11
Zm00001d018443_P001	Maize	mitochondrion	87.3	87.16
HORVU6Hr1G089010.1	Barley	nucleus	94.44	78.19
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	33.81	73.7
GSMUA_Achr10P...	Banana	nucleus	67.3	69.06
CDX86213	Canola	nucleus	68.25	68.69
GSMUA_Achr11P...	Banana	nucleus	69.84	68.64
CDY48669	Canola	nucleus	67.78	68.32
KRG92643	Soybean	cytosol	68.41	66.82
Bra036125.1-P	Field mustard	nucleus	64.92	66.4
VIT_14s0036g01030.t01	Wine grape	nucleus	69.52	66.36
AT3G04470.1	Thale cress	nucleus	67.3	66.25
Bra010013.1-P	Field mustard	nucleus	66.51	64.66
KRH68787	Soybean	nucleus	70.32	64.3
PGSC0003DMT400060183	Potato	nucleus	66.67	63.83
Solyc05g054970.2.1	Tomato	extracellular, nucleus	66.35	63.53
KRH34141	Soybean	plastid	68.41	59.45
PGSC0003DMT400025371	Potato	cytosol	56.98	59.14
CDY57011	Canola	nucleus, plastid	64.76	58.37
CDY00019	Canola	mitochondrion	64.76	58.12
PGSC0003DMT400025373	Potato	nucleus	11.75	54.81
Solyc06g036620.1.1	Tomato	cytosol, nucleus, plastid	53.17	53.43
Solyc06g036630.1.1	Tomato	endoplasmic reticulum	12.54	51.97
KRG97040	Soybean	nucleus	24.29	49.68
TraesCS2B01G274300.1	Wheat	plastid	36.98	38.51

Protein Annotations

EnsemblPlants:TraesCS6B01G417700.1	EnsemblPlantsGene:TraesCS6B01G417700	Gene3D:1.25.40.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	PFAM:PF11904	PFscan:PS50088	PFscan:PS50297
SEG:seg	SMART:SM00248	SUPFAM:SSF48403	TIGR:cd00204	MapMan:35.2	:

Description

No Description!

Coordinates

chr6B:-:689919675..689923171

Molecular Weight (calculated)

69930.6 Da

IEP (calculated)

7.808

GRAVY (calculated)

-0.642

Length

630 amino acids

Sequence
(BLAST)

001: MEDAARYAHS PAHLAVYRRD HAALRTLVAA LPRLPRAGEV TTEAESIAGE RVADAVSAVI DRRDVPRRET PLHLAVRLRD PVAADLLMSA GADWSLQNAD
101: GWSALQEAVC TREDAIATII ARHYQPLAWA KWCRRLPRVL ASVSRIRDFY MEISFHFESS VIPFIGRIAP SDTYRIWKRG AALRADMTLA GFDGFRIQRS
201: DQTFLFLGDG ARPEDAGGKE LLPGSLIVLS HKDKEITDAL EGAGVQPTES EVAHEVALMS KTNMYRPGID VTQADLVPHM NWRRQERTEA VGQWKAKVYD
301: MLNVLVTVKS RRVPGAMTDE ELFAMDGEEK NGRSAELETE LDEVLTAEER KQLDSALRGN QDEESEDRAE EGDKGADHLD ANGAGKDKKG WFWNGKKGAK
401: NDEKAPKAVS KDESGDAGKG KEKGNGKKKK GGVSSGDSNK LESEYKKGLR PVLWLTPDFP LKTDELIPLL DVLANKVKAV RRLRELLTTK LPTGTFPVKI
501: AIPIVPTIRV IVTFTKFEEL QPLDEFATPP TSPTQFQDAK SKDSEGSASW YSWVRGGRGA QSSDSGDSKN WKDEVDPFHI PSEYTWVDAT EKKRRMKAKK
601: AKNRRGTARK QSSKNTSSEG GQHPMMDGFE

Best Arabidopsis Sequence Match ( AT3G04470.1 )
(BLAST)

001: MEDYSKYTHS PAHLAVVLRD HAALRRIVSD LPRLAKAGEV TTEAESMESE SRADSVSAVI DRRDVPGRET PLHLAVRLRD PVSAEILMSA GADWSLQNEN
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9M840]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.