CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57011	Canola	nucleus, plastid	85.19	85.55
CDX86213	Canola	nucleus	71.79	80.51
CDY48669	Canola	nucleus	70.37	79.04
KRG97041	Soybean	cytoskeleton, cytosol, nucleus	30.34	73.7
AT3G04470.1	Thale cress	nucleus	65.1	71.41
VIT_14s0036g01030.t01	Wine grape	nucleus	62.39	66.36
EES05988	Sorghum	nucleus	59.4	66.09
GSMUA_Achr10P...	Banana	nucleus	57.41	65.64
KRG92643	Soybean	cytosol	60.26	65.58
Zm00001d051948_P001	Maize	cytosol	58.97	65.51
Os02t0810100-00	Rice	plasma membrane	58.83	65.24
Zm00001d018443_P001	Maize	mitochondrion	58.4	64.98
TraesCS6D01G363800.1	Wheat	nucleus	58.26	64.92
Solyc05g054970.2.1	Tomato	extracellular, nucleus	60.83	64.89
TraesCS6A01G379500.1	Wheat	nucleus	58.12	64.76
TraesCS6B01G417700.1	Wheat	nucleus	58.12	64.76
PGSC0003DMT400060183	Potato	nucleus	60.54	64.59
GSMUA_Achr11P...	Banana	nucleus	58.83	64.43
KRH68787	Soybean	nucleus	61.68	62.84
PGSC0003DMT400025371	Potato	cytosol	53.13	61.45
KRH34141	Soybean	plastid	61.68	59.72
Solyc06g036620.1.1	Tomato	cytosol, nucleus, plastid	48.29	54.07
CDX89790	Canola	cytosol	48.29	53.47
CDY18256	Canola	cytosol	48.43	52.8
HORVU6Hr1G089010.1	Barley	nucleus	57.12	52.69
CDX85149	Canola	nucleus, plastid	44.02	52.28
Solyc06g036630.1.1	Tomato	endoplasmic reticulum	10.68	49.34
CDY45348	Canola	cytosol	40.03	48.62
KRG97040	Soybean	nucleus	21.23	48.38
PGSC0003DMT400025373	Potato	nucleus	9.26	48.15
CDY07249	Canola	cytosol, plastid	37.18	45.87
CDY24874	Canola	cytosol	38.18	45.42
CDY31210	Canola	nucleus	32.91	44.51
CDY21008	Canola	cytosol	31.91	43.58
CDX97982	Canola	cytosol, nucleus, peroxisome	37.32	41.0
CDX77466	Canola	plastid	43.3	28.33
CDY49802	Canola	endoplasmic reticulum, peroxisome, plasma membrane	36.32	26.34

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.2	InterPro:ANKRD13	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlants:CDY00019	ProteinID:CDY00019	ProteinID:CDY00019.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00109496001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF11904	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR12447	PANTHER:PTHR12447:SF17	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0004EE94B6
SEG:seg	:	:	:	:	:

Description

BnaC09g02820D

Coordinates

chrLK031916:-:251703..254364

Molecular Weight (calculated)

78770.1 Da

IEP (calculated)

8.026

GRAVY (calculated)

-0.597

Length

702 amino acids

Sequence
(BLAST)

001: MVARSNCRWT IIINRSHSLP LESSGSSFGF LKPFSLLRYQ TLEQLAYVGH YFLRFVSAKV EDFQFNLANY TDGFFSPESI DIKMEDYSKY THSPAHLAVV
101: LHDHTALKRI VTNLPTLSKP GEVTSEAESL QAESNADSIT AVIDRRDVPN RETPLHLAVR LRDPVCAEIL MSAGADWSLQ NENGWSALQE AVCTREEAIA
201: MIIARHYQPL AWAKWCRRLP RITASASRIR DFYMEITFHF ESSVIPFVGR IAPSDTYRIW KRGCNLRADM TLAGFDGFRI QRSDQTFLFL GDGYASCDGK
301: VSLPPGALIV LSHKEKEVTN ALEGAGAQPT EAEVANEVKQ MSQTNMYRPG IDVTQAELVP QANWRRQERT ESVGSWKAKV YDMMHVMVSV KSRSVPGAMS
401: DEEMFAVDRD GDRMENGGEN DGFEDVLTSE ERKQLDSALL MEVDEENDHH QENGGSLKEK KGWFGWNKKG SKPGYDGGSE DNTATKVKKG SKLGSEKGKS
501: QRCDDTTKDN KGNAKKKKSE SEYKKGLRPV LWLTPDFPLK TEELLPLLDI LANKVKAVRR LRELLTTKLP TGTFPVKIAI PIIPTVRVLV TFTKFEELQP
601: SEEFSTPPSS PVFHDAKSSD NSSWVSWMKG ARGGGQASDC ESNKYRDDEV DPFLIPSDYT WVDSAEKKRR MKAKKARIRK NRKHGAPKPG SSSSRSNQEA
701: DA

Best Arabidopsis Sequence Match ( AT3G04470.1 )
(BLAST)

001: MEDYSKYTHS PAHLAVVLRD HAALRRIVSD LPRLAKAGEV TTEAESMESE SRADSVSAVI DRRDVPGRET PLHLAVRLRD PVSAEILMSA GADWSLQNEN
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9M840]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.