Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400025371 | Potato | cytosol | 74.48 | 76.94 |
| KRG97041 | Soybean | cytoskeleton, cytosol, nucleus | 33.65 | 73.01 |
| Solyc05g054970.2.1 | Tomato | extracellular, nucleus | 66.51 | 63.37 |
| VIT_14s0036g01030.t01 | Wine grape | nucleus | 64.91 | 61.67 |
| CDX86213 | Canola | nucleus | 57.58 | 57.67 |
| KRG92643 | Soybean | cytosol | 59.01 | 57.36 |
| AT3G04470.1 | Thale cress | nucleus | 57.74 | 56.56 |
| KRH68787 | Soybean | nucleus | 61.4 | 55.88 |
| CDY48669 | Canola | nucleus | 55.66 | 55.84 |
| GSMUA_Achr11P... | Banana | nucleus | 55.98 | 54.76 |
| Bra036125.1-P | Field mustard | nucleus | 53.75 | 54.71 |
| GSMUA_Achr10P... | Banana | nucleus | 52.95 | 54.07 |
| Bra010013.1-P | Field mustard | nucleus | 55.82 | 54.01 |
| Os02t0810100-00 | Rice | plasma membrane | 54.39 | 53.87 |
| EES05988 | Sorghum | nucleus | 54.07 | 53.72 |
| Zm00001d051948_P001 | Maize | cytosol | 54.07 | 53.64 |
| Zm00001d018443_P001 | Maize | mitochondrion | 53.75 | 53.41 |
| TraesCS6A01G379500.1 | Wheat | nucleus | 53.59 | 53.33 |
| TraesCS6B01G417700.1 | Wheat | nucleus | 53.43 | 53.17 |
| TraesCS6D01G363800.1 | Wheat | nucleus | 53.43 | 53.17 |
| KRH34141 | Soybean | plastid | 58.69 | 50.76 |
| CDY00019 | Canola | mitochondrion | 54.07 | 48.29 |
| CDY57011 | Canola | nucleus, plastid | 53.59 | 48.07 |
| Solyc09g091560.2.1 | Tomato | cytosol | 45.45 | 43.71 |
| HORVU6Hr1G089010.1 | Barley | nucleus | 52.31 | 43.1 |
| Solyc02g080610.2.1 | Tomato | cytosol | 32.38 | 34.7 |
| KRG97040 | Soybean | nucleus | 11.16 | 22.73 |
| Solyc06g036630.1.1 | Tomato | endoplasmic reticulum | 3.35 | 13.82 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.2 | InterPro:ANKRD13 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | UniProt:K4C527 | PFAM:PF11904 |
| PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR12447 | PANTHER:PTHR12447:SF17 | SUPFAM:SSF48403 | EnsemblPlantsGene:Solyc06g036620.1 |
| EnsemblPlants:Solyc06g036620.1.1 | UniParc:UPI000276613D | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6:+:26964000..26969589
Molecular Weight (calculated)
70723.9 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.537
Length
627 amino acids
Sequence
(BLAST)
(BLAST)
001: MYTETLLRSQ SNPFSLTNPF LSLLYFFPME DWSKYVHSPA HLVVAKRDYP TLKEIIDCLP CLAKAGEVNT EAESVAAEID ADVVSAVIDR RDVPGRETPL
101: HLAVRLKDPI SAENLMSTGV DWSLQNENGW SALQEAVCTR EENIAMIIAC HYQPLAWAKW CRRLPRIVAS AARIRDFYME MTFHFESSVI PFISRIAPSE
201: TYRIWKRGSN LRADMTLAGF DGFRIQRSDQ TFLFLGEGYS SETSSISLPP GSLIVLAHKE KEITNALEGA GVQPSEGEVA HEVALMSQAN MYRPGIDVTQ
301: AELVPHLNWR RQERTEMVGT WKASVYDMLH VMVSVKSRRV PGAMTDEELF SMNDDGKLTN CGEHDDYDGV LTAEERRQLN SALRTGNSDG LGDDEEDLEV
401: QDCHDNSSGG SFRSCESNGV PKQKKSWFGW NKKNSKGTGD DLEDSKIVKR FSKLAPDNTK QKSHEPHKSS SEVQGEDTRD LKRSKDKNGK KKKKKGPLGE
501: SKSEKELLPL LDILANKVKA IRRLRELLTT KLPPGTFPVK MALVEKFPSI YQIVVDKNST IAQNRNGNNW TILLRKTLND WEMHSLIVLL AEVEEYTIDE
601: NKTDAMCWGS KGTFIVKECY RQHGTHN
101: HLAVRLKDPI SAENLMSTGV DWSLQNENGW SALQEAVCTR EENIAMIIAC HYQPLAWAKW CRRLPRIVAS AARIRDFYME MTFHFESSVI PFISRIAPSE
201: TYRIWKRGSN LRADMTLAGF DGFRIQRSDQ TFLFLGEGYS SETSSISLPP GSLIVLAHKE KEITNALEGA GVQPSEGEVA HEVALMSQAN MYRPGIDVTQ
301: AELVPHLNWR RQERTEMVGT WKASVYDMLH VMVSVKSRRV PGAMTDEELF SMNDDGKLTN CGEHDDYDGV LTAEERRQLN SALRTGNSDG LGDDEEDLEV
401: QDCHDNSSGG SFRSCESNGV PKQKKSWFGW NKKNSKGTGD DLEDSKIVKR FSKLAPDNTK QKSHEPHKSS SEVQGEDTRD LKRSKDKNGK KKKKKGPLGE
501: SKSEKELLPL LDILANKVKA IRRLRELLTT KLPPGTFPVK MALVEKFPSI YQIVVDKNST IAQNRNGNNW TILLRKTLND WEMHSLIVLL AEVEEYTIDE
601: NKTDAMCWGS KGTFIVKECY RQHGTHN
001: MEDYSKYTHS PAHLAVVLRD HAALRRIVSD LPRLAKAGEV TTEAESMESE SRADSVSAVI DRRDVPGRET PLHLAVRLRD PVSAEILMSA GADWSLQNEN
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE
101: GWSALQEAVC TREEAIAMII ARHYQPLAWA KWCRRLPRII ASASRIRDFY MEITFHFESS VIPFIGRIAP SDTYRIWKRG SNLRADMTLA GFDGFKIQRS
201: DQTFLFLGDG YSSEDGKMSL SPGSLIVLSH KEKEMTNALE GAGAQPTDAE VAHEVALMSQ TNMYRPGIDV TQAELVSHLN WRRQERTEMV GNWKAKVYDM
301: LHVMVSVKSR RVPGAMTDEE LFAVDEERTA VTNGAETDGF EDVLTPEERL QLNSALQTGN SDAIEDEECE VTDQQENGAL KDKKGWFGWN KKGSNTEDTK
401: LKKGSKSAPE DGNQKGKSQK SSMVSDHANE DHGDAKKGKE KKKKKKGVAG DEVKRESEYK KGLRPVLWLT PDFPLTTDEL LPLLDILANK VKAVRRLREL
501: LTTKLPLGTF PVKLAIPIIP TVRVVVTFTK FEELQAAEEE FSTPPSSPVF HDAKSSSSEN SSPSWISWMR SGKSSDNDSN RYKDEADPFL IPSDYKWIDS
601: AEKKRRMKAK KAKSRRKKQA ATKAAGASDS GTRSNHVAEE
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9M840]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.