Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d007684_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 8.28 | 12.96 |
| Zm00001d004779_P001 | Maize | nucleus | 6.8 | 4.68 |
| Zm00001d053041_P002 | Maize | cytosol | 7.1 | 4.12 |
Protein Annotations
| Gene3D:3.30.70.330 | Gene3D:3.30.780.10 | MapMan:35.1 | UniProt:A0A1D6J1W7 | ProteinID:AQK42043.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006413 |
| GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| InterPro:IPR000504 | InterPro:IPR001950 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PFscan:PS50296 | PANTHER:PTHR23139 | PANTHER:PTHR23139:SF8 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SUPFAM:SSF54928 |
| SUPFAM:SSF55159 | InterPro:SUI1 | InterPro:SUI1_dom_sf | UniParc:UPI0008458ADF | EnsemblPlantsGene:Zm00001d024806 | EnsemblPlants:Zm00001d024806_P001 |
| EnsemblPlants:Zm00001d024806_T001 | SEG:seg | : | : | : | : |
Description
Cleavage stimulating factor 64
Coordinates
chr10:+:88824825..88833384
Molecular Weight (calculated)
37939.1 Da
IEP (calculated)
5.951
GRAVY (calculated)
-0.208
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKKFCCNGN VVQDPEISQV IQLQGDQHKD ALTSTIVQQL LVCISCLRLE EPGLCSYIPC VQLAALPYLT DIFVSITIHG RSLVIKNWER TKLEELKEAH
101: LVNSFSCQYV GGNYIVQCAT GSDVLRWRSL YASYDITWRV HYHEVFDHGT RESTKKVVLD DKLAEFALLD PKPSIATSEF TVVNMGNTLP VHDMSESTGY
201: STRHLRLGLG GGRGDDLVLP GLVIDKETGK PKGYGFCEYK DEETVLSACR DLQGYEINGC QLCVDFAENG RNTDSNREKV DNPQNYYRRA ITTTLEFFIN
301: TSSCIVFIHV NDNSCASSDY HVSPVVISYK HVYICTTS
101: LVNSFSCQYV GGNYIVQCAT GSDVLRWRSL YASYDITWRV HYHEVFDHGT RESTKKVVLD DKLAEFALLD PKPSIATSEF TVVNMGNTLP VHDMSESTGY
201: STRHLRLGLG GGRGDDLVLP GLVIDKETGK PKGYGFCEYK DEETVLSACR DLQGYEINGC QLCVDFAENG RNTDSNREKV DNPQNYYRRA ITTTLEFFIN
301: TSSCIVFIHV NDNSCASSDY HVSPVVISYK HVYICTTS
001: MASSSSQRRC VFVGNIPYDA TEEQLREICG EVGPVVSFRL VTDRETGKPK GYGFCEYKDE ETALSARRNL QSYEINGRQL RVDFAENDKG TDKTRDQSQG
101: GPGLPSTTTV TESQKQIGGP VDSNMHQPVG LHLATTAASV IAGALGGPQV GSQFTQSNLQ VPASDPLALH LAKMSRSQLT EIISSIKLMA TQNKEHARQL
201: LVSRPQLLKA VFLAQVMLGI VSPQVLQSPN IVQAPSHMTG SSIQDAQLSG QNLLPPLAQR SQQLSRAPHS QYPVQQSSKQ PFSQIPQLVA QPGPSSVNPP
301: PRSQVKVENA PFQRQQVVPA STNIGYSSQN SVPNNAIQPS QVPHQALPNS VMQQGGQTVS LNFGKRINEG PPHQSMNRPS KMMKVEDRRT TSLPGGHVSN
401: SMLPNQAQAP QTHISPDVQS TLLQQVMNLT PEQLRLLTPE QQQEVLKLQQ ALKQDHMMQP S
101: GPGLPSTTTV TESQKQIGGP VDSNMHQPVG LHLATTAASV IAGALGGPQV GSQFTQSNLQ VPASDPLALH LAKMSRSQLT EIISSIKLMA TQNKEHARQL
201: LVSRPQLLKA VFLAQVMLGI VSPQVLQSPN IVQAPSHMTG SSIQDAQLSG QNLLPPLAQR SQQLSRAPHS QYPVQQSSKQ PFSQIPQLVA QPGPSSVNPP
301: PRSQVKVENA PFQRQQVVPA STNIGYSSQN SVPNNAIQPS QVPHQALPNS VMQQGGQTVS LNFGKRINEG PPHQSMNRPS KMMKVEDRRT TSLPGGHVSN
401: SMLPNQAQAP QTHISPDVQS TLLQQVMNLT PEQLRLLTPE QQQEVLKLQQ ALKQDHMMQP S
Arabidopsis Description
CSTF64Cleavage stimulating factor 64 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9G6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.