Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039079_P002 | Maize | plasma membrane | 68.46 | 49.16 |
| Zm00001d044021_P001 | Maize | extracellular | 63.42 | 45.87 |
| Zm00001d011487_P001 | Maize | extracellular | 62.75 | 45.39 |
| Zm00001d003083_P002 | Maize | mitochondrion | 50.67 | 30.02 |
| Zm00001d021770_P012 | Maize | plastid | 18.12 | 26.09 |
Protein Annotations
| KEGG:00020+1.1.1.42 | KEGG:00480+1.1.1.42 | KEGG:00720+1.1.1.42 | Gene3D:3.40.718.10 | MapMan:50.1.1 | UniProt:A0A1D6P1U9 |
| ProteinID:AQL04003.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004450 | GO:GO:0005575 | GO:GO:0006102 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016616 |
| GO:GO:0055114 | InterPro:IsoPropMal-DH-like_dom | InterPro:Isocitrate_DH_NADP | PFAM:PF00180 | PFAM:PF03151 | PANTHER:PTHR11822 |
| PANTHER:PTHR11822:SF24 | SMART:SM01329 | SUPFAM:SSF53659 | InterPro:Sugar_P_trans_dom | UniParc:UPI00084329CA | EnsemblPlantsGene:Zm00001d046262 |
| EnsemblPlants:Zm00001d046262_P001 | EnsemblPlants:Zm00001d046262_T001 | : | : | : | : |
Description
Isocitrate dehydrogenase
Coordinates
chr9:-:77157097..77159734
Molecular Weight (calculated)
33721.7 Da
IEP (calculated)
8.275
GRAVY (calculated)
-0.116
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEVSFNWIG FWSAMTSNLM NQSRNVYSKK ILADKELLPR IASLPLNFVQ LIFPFVDLDI KYFDLGLPHR DATDDKVTVE AAEATLKYNV AIKCATITPD
101: EARVKEFGLK AMWKSPNGTI RNILNGNVFR EPIICRNIPQ LVPGWTKPIC IGRHAFGDQY RATDAVIKGP GKLKLVFEGK EEQVELEVFN FTGAGGVALS
201: MYNTDESIHA FADASMATAY EKKWPLYLST KNNILKKYDG MFKDIFQEVY EAGWKPNLKL PAYGIVSNPV SYPIFFFNKV FWLIGFDDFG TGNCQFSK
101: EARVKEFGLK AMWKSPNGTI RNILNGNVFR EPIICRNIPQ LVPGWTKPIC IGRHAFGDQY RATDAVIKGP GKLKLVFEGK EEQVELEVFN FTGAGGVALS
201: MYNTDESIHA FADASMATAY EKKWPLYLST KNNILKKYDG MFKDIFQEVY EAGWKPNLKL PAYGIVSNPV SYPIFFFNKV FWLIGFDDFG TGNCQFSK
001: MEFEKIKVIN PVVEMDGDEM TRVIWKFIKD KLIFPFLELD IKYFDLGLPN RDFTDDKVTI ETAEATLKYN VAIKCATITP DEARVREFGL KKMWRSPNGT
101: IRNILNGTVF REPIICRNIP RLVPGWTKPI CIGRHAFGDQ YRATDLIVNE PGKLKLVFEP SGSSQKTEFE VFNFTGGGVA LAMYNTDESI RAFAESSMYT
201: AYQKKWPLYL STKNTILKIY DGRFKDIFQE VYEANWRSKY EAAGIWYEHR LIDDMVAYAM KSEGGYVWAC KNYDGDVQSD FLAQGYGSLG MMTSVLVCPD
301: GKTIEAEAAH GTVTRHYRVH QKGGETSTNS IASIFAWSRG LAHRAKLDSN AALLSYTEKL EAACMGTVES GKMTKDLALL IHGAKVRRDQ YVNTEEFIDA
401: VAWELKRRLL GNNSRL
101: IRNILNGTVF REPIICRNIP RLVPGWTKPI CIGRHAFGDQ YRATDLIVNE PGKLKLVFEP SGSSQKTEFE VFNFTGGGVA LAMYNTDESI RAFAESSMYT
201: AYQKKWPLYL STKNTILKIY DGRFKDIFQE VYEANWRSKY EAAGIWYEHR LIDDMVAYAM KSEGGYVWAC KNYDGDVQSD FLAQGYGSLG MMTSVLVCPD
301: GKTIEAEAAH GTVTRHYRVH QKGGETSTNS IASIFAWSRG LAHRAKLDSN AALLSYTEKL EAACMGTVES GKMTKDLALL IHGAKVRRDQ YVNTEEFIDA
401: VAWELKRRLL GNNSRL
Arabidopsis Description
ICDHPeroxisomal isocitrate dehydrogenase [NADP] [Source:UniProtKB/Swiss-Prot;Acc:Q9SLK0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.