Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15245 | Canola | nucleus | 63.38 | 69.77 |
| CDX89967 | Canola | nucleus | 66.2 | 66.2 |
| Bra032601.1-P | Field mustard | nucleus | 62.68 | 60.54 |
| CDY72572 | Canola | nucleus | 62.68 | 60.54 |
| CDY32466 | Canola | nucleus | 61.97 | 59.86 |
| AT4G01895.1 | Thale cress | nucleus | 38.73 | 39.29 |
Protein Annotations
| MapMan:35.1 | EntrezGene:837800 | UniProt:A0A178WC43 | ProteinID:AAG10641.1 | EMBL:AC064879 | ProteinID:AEE27431.1 |
| EMBL:AJ250184 | EMBL:AK119149 | ArrayExpress:AT1G02450 | EnsemblPlantsGene:AT1G02450 | RefSeq:AT1G02450 | TAIR:AT1G02450 |
| RefSeq:AT1G02450-TAIR-G | EnsemblPlants:AT1G02450.1 | TAIR:AT1G02450.1 | EMBL:BT003662 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 | GO:GO:0010112 | GO:GO:0042742 | GO:GO:0045892 |
| InterPro:NIMIN-1 | Symbol:NIMIN1 | InterPro:NPR1/NH1-interacting | RefSeq:NP_563653.2 | ProteinID:OAP16010.1 | PFAM:PF15699 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33669 | PANTHER:PTHR33669:SF9 |
| UniProt:Q9FNZ5 | UniParc:UPI000000C0EC | SEG:seg | : | : | : |
Description
NIMIN-1NIMIN1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC43]
Coordinates
chr1:-:497917..498539
Molecular Weight (calculated)
16818.5 Da
IEP (calculated)
4.725
GRAVY (calculated)
-1.256
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPKQFSLYN YSLETMSKDE NVESKETIRV DKRVREDEEE EEEKKIDTFF KLIKHYQEAR KRRREELAEN SGVVRRKSNG GERSGIVVPA FQPEDFSQCR
101: TGLKPPLMFV SDHKEENTKV EQEEDQTEER NEDKALDLNL AL
101: TGLKPPLMFV SDHKEENTKV EQEEDQTEER NEDKALDLNL AL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.