Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G10690.1 | Thale cress | nucleus | 61.32 | 59.09 |
| CDY67411 | Canola | cytosol | 57.55 | 55.45 |
| Bra027129.1-P | Field mustard | cytosol | 56.6 | 54.55 |
| CDY40498 | Canola | cytosol | 56.6 | 54.55 |
| AT5G40460.1 | Thale cress | nucleus | 44.34 | 41.96 |
| AT3G27630.1 | Thale cress | cytosol | 31.13 | 33.33 |
Protein Annotations
| MapMan:13.1.1.3.2 | EntrezGene:6240271 | ProteinID:ABF59303.1 | ProteinID:ABK27997.1 | EMBL:AC002292 | ProteinID:AEE33732.1 |
| ArrayExpress:AT1G60783 | EnsemblPlantsGene:AT1G60783 | RefSeq:AT1G60783 | TAIR:AT1G60783 | RefSeq:AT1G60783-TAIR-G | EnsemblPlants:AT1G60783.1 |
| TAIR:AT1G60783.1 | Unigene:At.68969 | GO:GO:0003674 | GO:GO:0004860 | GO:GO:0006464 | GO:GO:0006469 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 |
| RefSeq:NP_001117521.1 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF2 | UniProt:Q1G3Y4 | UniParc:UPI0000D7C823 | : |
Description
SMR15Cyclin-dependent protein kinase inhibitor SMR15 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3Y4]
Coordinates
chr1:+:22374909..22375846
Molecular Weight (calculated)
11712.0 Da
IEP (calculated)
8.863
GRAVY (calculated)
-0.392
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSGKTYHQ FDRKFSETTE GKKCVITGIS LHSTVKPISL SSSAVSNTED EDLCPTTPTA DSVRIPTVIP CPPAPKKRKL TLKVSYGPRE FFSPPDLETV
101: FIYRTT
101: FIYRTT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.