Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039074.1-P | Field mustard | cytosol | 66.67 | 62.86 |
| CDY20043 | Canola | cytosol | 65.66 | 61.9 |
| CDY00151 | Canola | nucleus | 67.68 | 60.36 |
| CDX83722 | Canola | nucleus | 66.67 | 58.41 |
| Bra025292.1-P | Field mustard | nucleus | 64.65 | 55.17 |
| AT5G40460.1 | Thale cress | nucleus | 57.58 | 50.89 |
| CDX83719 | Canola | cytosol | 43.43 | 44.33 |
| VIT_14s0066g00600.t01 | Wine grape | nucleus | 43.43 | 41.75 |
| Solyc02g067810.1.1 | Tomato | nucleus | 40.4 | 38.46 |
| PGSC0003DMT400017807 | Potato | cytosol | 38.38 | 36.54 |
| AT1G10690.1 | Thale cress | nucleus | 40.4 | 36.36 |
| Solyc02g086450.1.1 | Tomato | cytosol | 37.37 | 35.24 |
| PGSC0003DMT400032809 | Potato | nucleus | 39.39 | 35.14 |
| KRH56563 | Soybean | nucleus | 37.37 | 33.64 |
| KRG93247 | Soybean | nucleus | 36.36 | 33.33 |
| AT1G60783.1 | Thale cress | nucleus | 33.33 | 31.13 |
Protein Annotations
| MapMan:13.1.1.3.2 | EntrezGene:822385 | ProteinID:ABE65490.1 | ProteinID:ABK28223.1 | ProteinID:AEE77346.1 | ArrayExpress:AT3G27630 |
| EnsemblPlantsGene:AT3G27630 | RefSeq:AT3G27630 | TAIR:AT3G27630 | RefSeq:AT3G27630-TAIR-G | EnsemblPlants:AT3G27630.1 | TAIR:AT3G27630.1 |
| ProteinID:BAB02687.1 | GO:GO:0003674 | GO:GO:0004860 | GO:GO:0006464 | GO:GO:0006469 | GO:GO:0006950 |
| GO:GO:0006974 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0030234 | RefSeq:NP_189400.1 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF2 | UniProt:Q9LVX6 | UniParc:UPI00000A830A |
Description
SMR7Cyclin-dependent protein kinase inhibitor SMR7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVX6]
Coordinates
chr3:-:10230892..10231567
Molecular Weight (calculated)
11200.7 Da
IEP (calculated)
10.670
GRAVY (calculated)
-0.579
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MGISKKSQVS RELDTDGKKF IFAKTSIRAS LKPVKTKLIK PERESEDGIC ITPTARGAKT PECPAAPRKR PPVLKCQNNI RIEYFVPPSD FELVFIQRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.