Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20043 | Canola | cytosol | 99.05 | 99.05 |
| Bra025292.1-P | Field mustard | nucleus | 80.95 | 73.28 |
| Bra025573.1-P | Field mustard | cytosol | 71.43 | 70.75 |
| AT3G27630.1 | Thale cress | cytosol | 62.86 | 66.67 |
| VIT_14s0066g00600.t01 | Wine grape | nucleus | 45.71 | 46.6 |
| Solyc02g067810.1.1 | Tomato | nucleus | 42.86 | 43.27 |
| Solyc02g086450.1.1 | Tomato | cytosol | 41.9 | 41.9 |
| PGSC0003DMT400032809 | Potato | nucleus | 43.81 | 41.44 |
| PGSC0003DMT400017807 | Potato | cytosol | 40.95 | 41.35 |
| KRG93247 | Soybean | nucleus | 40.95 | 39.81 |
| KRH56563 | Soybean | nucleus | 40.95 | 39.09 |
| Bra019906.1-P | Field mustard | cytosol, nucleus, plastid | 40.0 | 38.18 |
| Bra027129.1-P | Field mustard | cytosol | 33.33 | 31.82 |
Protein Annotations
Description
AT3G27630 (E=9e-022) | unknown protein
Coordinates
chrA09:-:1250489..1250806
Molecular Weight (calculated)
11657.1 Da
IEP (calculated)
10.083
GRAVY (calculated)
-0.769
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSKKSQVG KGLDTAGEQW VIAEISIRAS LKPVKTKLRK PERETEAEDE GYCITPTAKG DKASEKLKCP PAPRKRRPAL KCRSNVGIEY FVPPEDLETV
101: FIRRG
101: FIRRG
1: MGISKKSQVS RELDTDGKKF IFAKTSIRAS LKPVKTKLIK PERESEDGIC ITPTARGAKT PECPAAPRKR PPVLKCQNNI RIEYFVPPSD FELVFIQRR
Arabidopsis Description
SMR7Cyclin-dependent protein kinase inhibitor SMR7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVX6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.