Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83722 | Canola | nucleus | 69.07 | 59.29 |
| Bra025292.1-P | Field mustard | nucleus | 65.98 | 55.17 |
| CDY00151 | Canola | nucleus | 61.86 | 54.05 |
| CDY20043 | Canola | cytosol | 54.64 | 50.48 |
| CDY42582 | Canola | cytosol | 51.55 | 47.17 |
| CDY50122 | Canola | nucleus | 50.52 | 46.23 |
| AT3G27630.1 | Thale cress | cytosol | 44.33 | 43.43 |
| KRG93247 | Soybean | nucleus | 34.02 | 30.56 |
| VIT_14s0066g00600.t01 | Wine grape | nucleus | 30.93 | 29.13 |
| KRH56563 | Soybean | nucleus | 30.93 | 27.27 |
| Solyc02g086450.1.1 | Tomato | cytosol | 28.87 | 26.67 |
| PGSC0003DMT400017807 | Potato | cytosol | 27.84 | 25.96 |
| Solyc02g067810.1.1 | Tomato | nucleus | 27.84 | 25.96 |
| CDY67838 | Canola | cytosol, nucleus, plastid | 27.84 | 24.55 |
| CDY19313 | Canola | nucleus | 27.84 | 24.55 |
| PGSC0003DMT400032809 | Potato | nucleus | 27.84 | 24.32 |
| CDY67411 | Canola | cytosol | 22.68 | 20.0 |
| CDY40498 | Canola | cytosol | 20.62 | 18.18 |
Protein Annotations
| EnsemblPlants:CDX83719 | EnsemblPlantsGene:GSBRNA2T00139430001 | ProteinID:CDX83719 | ProteinID:CDX83719.1 | SEG:seg | UniParc:UPI0004EF32F9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC07g24590D
Coordinates
chrLK031833:+:1806311..1806604
Molecular Weight (calculated)
11117.3 Da
IEP (calculated)
5.787
GRAVY (calculated)
-0.604
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: METSKKSLVC RGLDTDGKKW DIAEISIRAS LKPVKTKLKR TERDTEAEEE HYSGSEEYCI TPTAKEAKLS EKLICTDFQH FEKTDLVVIC CCFDPLR
1: MGISKKSQVS RELDTDGKKF IFAKTSIRAS LKPVKTKLIK PERESEDGIC ITPTARGAKT PECPAAPRKR PPVLKCQNNI RIEYFVPPSD FELVFIQRR
Arabidopsis Description
SMR7Cyclin-dependent protein kinase inhibitor SMR7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVX6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.