Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra019906.1-P | Field mustard | cytosol, nucleus, plastid | 71.82 | 71.82 |
CDY67838 | Canola | cytosol, nucleus, plastid | 71.82 | 71.82 |
CDY19313 | Canola | nucleus | 69.09 | 69.09 |
AT1G60783.1 | Thale cress | nucleus | 59.09 | 61.32 |
AT5G40460.1 | Thale cress | nucleus | 48.18 | 47.32 |
AT3G27630.1 | Thale cress | cytosol | 36.36 | 40.4 |
Protein Annotations
MapMan:13.1.1.3.2 | EntrezGene:837612 | UniProt:A0A178W420 | ProteinID:AAD31344.1 | ProteinID:AEE28629.1 | ArrayExpress:AT1G10690 |
EnsemblPlantsGene:AT1G10690 | RefSeq:AT1G10690 | TAIR:AT1G10690 | RefSeq:AT1G10690-TAIR-G | EnsemblPlants:AT1G10690.1 | TAIR:AT1G10690.1 |
EMBL:BT012351 | EMBL:BT012362 | GO:GO:0003674 | GO:GO:0004860 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0006464 | GO:GO:0006469 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
GO:GO:0019538 | GO:GO:0030234 | RefSeq:NP_172539.1 | ProteinID:OAP11862.1 | PO:PO:0000293 | PO:PO:0001078 |
PO:PO:0009009 | PO:PO:0009047 | PO:PO:0025022 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF2 | UniProt:Q9SAD3 |
UniParc:UPI00000A44C0 | SEG:seg | : | : | : | : |
Description
SMR8Cyclin-dependent protein kinase inhibitor SMR8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAD3]
Coordinates
chr1:-:3549920..3550848
Molecular Weight (calculated)
12166.5 Da
IEP (calculated)
9.221
GRAVY (calculated)
-0.606
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYSGKPHHQ LDGEIRESTD GKKWVIAGIP SRSPLKQINL SPGVTVTETE EQDQCPTTPT AVSVRIPRVP PCPAAPKKRK PSLKCSYVTV TRDYFSPPDL
101: ETVFIQRASY
101: ETVFIQRASY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.