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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019906.1-P Field mustard cytosol, nucleus, plastid 71.82 71.82
CDY67838 Canola cytosol, nucleus, plastid 71.82 71.82
CDY19313 Canola nucleus 69.09 69.09
AT1G60783.1 Thale cress nucleus 59.09 61.32
AT5G40460.1 Thale cress nucleus 48.18 47.32
AT3G27630.1 Thale cress cytosol 36.36 40.4
Protein Annotations
MapMan:13.1.1.3.2EntrezGene:837612UniProt:A0A178W420ProteinID:AAD31344.1ProteinID:AEE28629.1ArrayExpress:AT1G10690
EnsemblPlantsGene:AT1G10690RefSeq:AT1G10690TAIR:AT1G10690RefSeq:AT1G10690-TAIR-GEnsemblPlants:AT1G10690.1TAIR:AT1G10690.1
EMBL:BT012351EMBL:BT012362GO:GO:0003674GO:GO:0004860GO:GO:0005488GO:GO:0005515
GO:GO:0006464GO:GO:0006469GO:GO:0007049GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0019538GO:GO:0030234RefSeq:NP_172539.1ProteinID:OAP11862.1PO:PO:0000293PO:PO:0001078
PO:PO:0009009PO:PO:0009047PO:PO:0025022PANTHER:PTHR33142PANTHER:PTHR33142:SF2UniProt:Q9SAD3
UniParc:UPI00000A44C0SEG:seg::::
Description
SMR8Cyclin-dependent protein kinase inhibitor SMR8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAD3]
Coordinates
chr1:-:3549920..3550848
Molecular Weight (calculated)
12166.5 Da
IEP (calculated)
9.221
GRAVY (calculated)
-0.606
Length
110 amino acids
Sequence
(BLAST)
001: MGYSGKPHHQ LDGEIRESTD GKKWVIAGIP SRSPLKQINL SPGVTVTETE EQDQCPTTPT AVSVRIPRVP PCPAAPKKRK PSLKCSYVTV TRDYFSPPDL
101: ETVFIQRASY
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.