Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71985 | Canola | nucleus, plastid | 50.0 | 55.47 |
| Bra033934.1-P | Field mustard | nucleus, plastid | 49.34 | 54.74 |
| CDY44897 | Canola | nucleus, plastid | 49.34 | 54.74 |
| VIT_01s0011g03650.t01 | Wine grape | nucleus | 44.08 | 34.18 |
| AT3G18360.1 | Thale cress | nucleus | 34.21 | 18.25 |
Protein Annotations
| MapMan:35.1 | EntrezGene:843174 | ProteinID:AAG52394.1 | ProteinID:AEE34795.1 | EMBL:AK117732 | ArrayExpress:AT1G68450 |
| EnsemblPlantsGene:AT1G68450 | RefSeq:AT1G68450 | TAIR:AT1G68450 | RefSeq:AT1G68450-TAIR-G | EnsemblPlants:AT1G68450.1 | TAIR:AT1G68450.1 |
| Unigene:At.35523 | EMBL:BT003665 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | RefSeq:NP_177012.1 | PFAM:PF05678 | PO:PO:0009047 |
| PANTHER:PTHR33143 | PANTHER:PTHR33143:SF11 | UniProt:Q9CA36 | UniParc:UPI000000C0EF | InterPro:VQ | SEG:seg |
Description
VQ8VQ motif-containing protein 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CA36]
Coordinates
chr1:-:25661487..25662276
Molecular Weight (calculated)
16913.1 Da
IEP (calculated)
10.023
GRAVY (calculated)
-0.568
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPTRCNEIN GSRPSSLKLA GESHTIKKTS SCKSKPRPHG RASPVIIYAH SPKVIHTRAE DFMALVQRLT GLDEIIRRNT SESSSSVVTE EVNVGDDNTA
101: APFSQDRTQR QKLTDMPLFT PSSMTLFGSP TQLMYMSPNR TDSFRPLVFK SE
101: APFSQDRTQR QKLTDMPLFT PSSMTLFGSP TQLMYMSPNR TDSFRPLVFK SE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.